RNA–Protein interactions for RNA: ENSMUST00000034776.12

Cln6-201, Transcript of Ceroid-lipofuscinosis, neuronal 6, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Cln6, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Cln6-201ENSMUST00000034776 Tmem42Q9CR22 157 aa20.48■□□□□ 0.87
Cln6-201ENSMUST00000034776 Ppp1r35Q9D8C8 260 aa20.48■□□□□ 0.87
Cln6-201ENSMUST00000034776 FcrlsQ9EQY5 509 aa20.48■□□□□ 0.87
Cln6-201ENSMUST00000034776 Olfr1018A2ASV3 311 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Vmn1r7E9Q8T0 311 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Fkbp8O35465 402 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 PlatP11214 559 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Hsd17b8P50171 259 aaKnown RBP20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 CtdsplP58465 276 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Csrp1P97315 193 aaKnown RBP20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Btg2Q04211 158 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Acp5Q05117 327 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Gramd2aQ3V3G7 320 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Pgm2Q7TSV4 620 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Yipf6Q8BR70 236 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Fam120cQ8C3F2 1091 aaKnown RBP20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Dnajc22Q8CHS2 339 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Olfr642Q924X8 314 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 SigirrQ9JLZ8 409 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Olfr911-ps1A0A140T8K0 311 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Nr1h5E9Q5A6 505 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Srsf6Q3TWW8 339 aaKnown RBP20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Spc25Q3UA16 226 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Gm6899Q3USS0 134 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Tas2r3Q7TQA7 316 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Adhfe1Q8R0N6 465 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Olfr120Q8VFQ2 330 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Dtwd2Q9D0U1 298 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Vmn1r172Q9EPS4 313 aa20.47■□□□□ 0.87
Cln6-201ENSMUST00000034776 Lcn5A2AJB7 192 aa20.46■□□□□ 0.87
Cln6-201ENSMUST00000034776 Olfr288E9Q1P2 318 aa20.46■□□□□ 0.87
Cln6-201ENSMUST00000034776 Stc2O88452 296 aa20.46■□□□□ 0.87
Cln6-201ENSMUST00000034776 P01746 140 aa20.46■□□□□ 0.87
Cln6-201ENSMUST00000034776 SparcP07214 302 aa20.46■□□□□ 0.87
Cln6-201ENSMUST00000034776 Gpr85P60894 370 aa20.46■□□□□ 0.87
Cln6-201ENSMUST00000034776 Map2k6P70236 334 aaKnown RBP20.46■□□□□ 0.87
Cln6-201ENSMUST00000034776 Them4Q3UUI3 230 aa20.46■□□□□ 0.87
Cln6-201ENSMUST00000034776 Dpp10Q6NXK7 797 aa20.46■□□□□ 0.87
Cln6-201ENSMUST00000034776 Tmem242Q8VCR3 140 aa20.46■□□□□ 0.87
Cln6-201ENSMUST00000034776 D10Wsu102eQ9CX66 185 aa20.46■□□□□ 0.87
Cln6-201ENSMUST00000034776 Tstd3Q9D0B5 157 aa20.46■□□□□ 0.87
Cln6-201ENSMUST00000034776 Tex33Q9D9J2 266 aa20.46■□□□□ 0.87
Cln6-201ENSMUST00000034776 Eif3kQ9DBZ5 218 aa20.46■□□□□ 0.87
Cln6-201ENSMUST00000034776 RhouQ9EQT3 261 aa20.46■□□□□ 0.87
Cln6-201ENSMUST00000034776 Gm29276A0A087WNW5 222 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Gm20792A0A087WRF5 222 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Gm28490A0A087WRT9 222 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Gm21996A0A087WSS9 222 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Mtg2A2AFK4 405 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Mpig6bD7PDD4 242 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Zfp988F6VKC7 633 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Gm21411J3KMS0 136 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Upk2P38575 184 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Rps15P62843 145 aaKnown RBP20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Zfp987Q32P14 633 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Gm10912Q3UXH0 145 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Tmem171Q4KL18 322 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Vezf1Q5SXC4 518 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Olfr5Q60889 312 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Olfr969Q8VG89 311 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Sfxn5Q925N0 342 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Atp6v1g1Q9CR51 118 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Alyref2Q9JJW6 218 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Bod1lE9Q6J5 3032 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Trbc1A0A0A6YWV4 173 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Scml2B1AVB3 969 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Olfr585E9PXW4 318 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Gm2663F6R7E8 247 aaKnown RBP20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Trav13d-3J3QMG8 112 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Cacng2O88602 323 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Hprt1P00493 218 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 P01852 173 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Zfp13P10754 512 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Cox5aP12787 146 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Olfr1428Q0VDY1 314 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Olfr733Q14AK5 308 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Mfsd2bQ3T9M1 494 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Epha1Q60750 977 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Tas2r113Q7M711 309 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Negr1Q80Z24 348 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 H2-M10.3Q85ZW6 330 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Zfp747Q8BHM7 422 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Aifm2Q8BUE4 373 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Cbx7Q8VDS3 158 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Sntb1Q99L88 537 aaKnown RBP20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 1810009J06RikQ9CPN7 247 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 VcanQ62059 3357 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 FancmQ8BGE5 2021 aa20.45■□□□□ 0.86
Cln6-201ENSMUST00000034776 Trav10nA0A075B622 114 aa20.44■□□□□ 0.86
Cln6-201ENSMUST00000034776 Trav10A0A075B642 114 aa20.44■□□□□ 0.86
Cln6-201ENSMUST00000034776 Vmn1r82A0A087WRV1 305 aa20.44■□□□□ 0.86
Cln6-201ENSMUST00000034776 Dcst2A0A140LIJ0 701 aa20.44■□□□□ 0.86
Cln6-201ENSMUST00000034776 Rpl7a-ps5A0A140T8L3 268 aa20.44■□□□□ 0.86
Cln6-201ENSMUST00000034776 Vmn1r91E9PZR7 307 aa20.44■□□□□ 0.86
Cln6-201ENSMUST00000034776 Olfr550E9Q544 316 aa20.44■□□□□ 0.86
Cln6-201ENSMUST00000034776 Nipsnap1O55125 284 aa20.44■□□□□ 0.86
Cln6-201ENSMUST00000034776 Coq7P97478 217 aa20.44■□□□□ 0.86
Cln6-201ENSMUST00000034776 XkrxQ5GH68 449 aa20.44■□□□□ 0.86
Cln6-201ENSMUST00000034776 Bcap29Q61334 240 aa20.44■□□□□ 0.86
Cln6-201ENSMUST00000034776 Olfr1101Q7TR59 310 aa20.44■□□□□ 0.86
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms