RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 RHOUQ7L0Q8 258 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 ANGPTL5Q86XS5 388 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 CHST4Q8NCG5 386 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 AQP3Q92482 292 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 CYYR1Q96J86 154 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 PIGQQ9BRB3 760 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 UQCC2Q9BRT2 126 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 NAA11Q9BSU3 229 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-229ENST00000641891 RBM24Q9BX46 236 aaKnown RBP14.95□□□□□ -0.02
PHGDH-229ENST00000641891 SCPEP1Q9HB40 452 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 FBXO4Q9UKT5 387 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 A0A0A6YYH2 397 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 A6NJ64 397 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 SMAD9O15198 467 aaKnown RBP14.95□□□□□ -0.02
PHGDH-229ENST00000641891 BPNT1O95861 308 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 IGHEP01854 428 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 P04436 131 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 CSN2P05814 226 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 GRB2P62993 217 aaKnown RBP14.95□□□□□ -0.02
PHGDH-229ENST00000641891 CSNK2A1P68400 391 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-229ENST00000641891 SLC22A6Q4U2R8 563 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 DBX2Q6ZNG2 339 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 RAB11FIP2Q7L804 512 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 CHMP1BQ7LBR1 199 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 FJX1Q86VR8 437 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 DTX1Q86Y01 620 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 MUC20Q8N307 709 aaPredicted RBP14.95□□□□□ -0.02
PHGDH-229ENST00000641891 FTMTQ8N4E7 242 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 UXS1Q8NBZ7 420 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 LYZL4Q96KX0 146 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 NELFAQ9H3P2 528 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 KIAA1549Q9HCM3 1950 aa14.95□□□□□ -0.02
PHGDH-229ENST00000641891 FARSAQ9Y285 508 aaKnown RBP14.95□□□□□ -0.02
PHGDH-229ENST00000641891 LNP1A1A4G5 178 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 METTL21EPA6NDL7 271 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 CYB5AP00167 134 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 AMY2AP04746 511 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 OR3A4PP47883 348 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 TSPAN5P62079 268 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 LSM6P62312 80 aaKnown RBP14.94□□□□□ -0.02
PHGDH-229ENST00000641891 OC90Q02509 493 aaPredicted RBP14.94□□□□□ -0.02
PHGDH-229ENST00000641891 POU4F3Q15319 338 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 IDO2Q6ZQW0 420 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 GVQW1Q8N7I0 195 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 OR14L1PQ8NHC6 308 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 NUDCD2Q8WVJ2 157 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 LIN37Q96GY3 246 aaPredicted RBP14.94□□□□□ -0.02
PHGDH-229ENST00000641891 SGCZQ96LD1 299 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 NICN1Q9BSH3 213 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 POFUT1Q9H488 388 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 LRRC3CA6NJW4 275 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 F5H5K5 113 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 ALX3O95076 343 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 ITGB2P05107 769 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 ZNF735P0CB33 412 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 GNB3P16520 340 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 CHAF1BQ13112 559 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 CDNFQ49AH0 187 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 ZBTB37Q5TC79 503 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 TEX261Q6UWH6 196 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 TRAPPC6BQ86SZ2 158 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 PGAM5Q96HS1 289 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 DEPPQ9NTK1 212 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 FOXD3Q9UJU5 478 aaPredicted RBP14.94□□□□□ -0.02
PHGDH-229ENST00000641891 U3KQ87 197 aa14.94□□□□□ -0.02
PHGDH-229ENST00000641891 ZNF736B4DX44 427 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-229ENST00000641891 DHHO43323 396 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 VAMP5O95183 116 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 MPC2O95563 127 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 HPP00738 406 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 GIPP09681 153 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-229ENST00000641891 SP9P0CG40 484 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 CCL1P22362 96 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 SRD5A2P31213 254 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 NTF4P34130 210 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 GUCA1AP43080 201 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-229ENST00000641891 STARP49675 285 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 NKPD1Q17RQ9 610 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 ACER2Q5QJU3 275 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 GLIPR1L1Q6UWM5 242 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 FOXL2NBQ6ZUU3 175 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 ZNF101Q8IZC7 436 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 BEST3Q8N1M1 668 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 TMEM104Q8NE00 496 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 SLC6A7Q99884 636 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 DPCDQ9BVM2 203 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-229ENST00000641891 ULBP2Q9BZM5 246 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 P4HTMQ9NXG6 502 aa14.93□□□□□ -0.02
PHGDH-229ENST00000641891 MRPS28Q9Y2Q9 187 aaKnown RBP14.93□□□□□ -0.02
PHGDH-229ENST00000641891 NCOA6Q14686 2063 aaPredicted RBP14.93□□□□□ -0.02
PHGDH-229ENST00000641891 A0A0A6YYD4 124 aa14.92□□□□□ -0.02
PHGDH-229ENST00000641891 IGKV1-9A0A0C4DH69 117 aa14.92□□□□□ -0.02
PHGDH-229ENST00000641891 PINLYPA6NC86 204 aa14.92□□□□□ -0.02
PHGDH-229ENST00000641891 TMEM14DPA8MWL7 114 aa14.92□□□□□ -0.02
PHGDH-229ENST00000641891 DBHP09172 617 aa14.92□□□□□ -0.02
PHGDH-229ENST00000641891 SLC6A9P48067 706 aa14.92□□□□□ -0.02
PHGDH-229ENST00000641891 ZNF133P52736 654 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-229ENST00000641891 H2BFSP57053 126 aa14.92□□□□□ -0.02
PHGDH-229ENST00000641891 RSPO1Q2MKA7 263 aaPredicted RBP14.92□□□□□ -0.02
PHGDH-229ENST00000641891 C4orf46Q504U0 113 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 174.4 ms