RNA–Protein interactions for RNA: ENST00000639695.1

RFC1-217, Transcript of replication factor C subunit 1, humanhuman

TSL 5 BASIC

Gene RFC1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-217ENST00000639695 ZNF681Q96N22 645 aa4.46□□□□□ -1.7
RFC1-217ENST00000639695 TRNT1Q96Q11 434 aaKnown RBP4.46□□□□□ -1.7
RFC1-217ENST00000639695 HDHD3Q9BSH5 251 aaPredicted RBP4.46□□□□□ -1.7
RFC1-217ENST00000639695 COPS4Q9BT78 406 aa4.46□□□□□ -1.7
RFC1-217ENST00000639695 C6orf50Q9HD87 102 aa4.46□□□□□ -1.7
RFC1-217ENST00000639695 DAZ3Q9NR90 486 aaKnown RBP4.46□□□□□ -1.7
RFC1-217ENST00000639695 RGS18Q9NS28 235 aa4.46□□□□□ -1.7
RFC1-217ENST00000639695 IL17CQ9P0M4 197 aa4.46□□□□□ -1.7
RFC1-217ENST00000639695 PSG8Q9UQ74 426 aa4.46□□□□□ -1.7
RFC1-217ENST00000639695 TP53BP1Q12888 1972 aaPredicted RBP4.45□□□□□ -1.7
RFC1-217ENST00000639695 PLAC8L1A1L4L8 177 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 ALOX12BO75342 701 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 CST4P01036 141 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 PTHP01270 115 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 CXCL5P42830 114 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 MAP3K7CLP57077 242 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 VSNL1P62760 191 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 RPL31P62899 125 aaKnown RBP4.45□□□□□ -1.7
RFC1-217ENST00000639695 ARG2P78540 354 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 PRR3P79522 188 aaKnown RBP4.45□□□□□ -1.7
RFC1-217ENST00000639695 IFFO1Q0D2I5 559 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 RGNQ15493 299 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 TAL2Q16559 108 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 OR2T5Q6IEZ7 315 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 PLET1Q6UQ28 207 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 LYPD2Q6UXB3 125 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 LINC00612Q8N6U2 182 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 COX18Q8N8Q8 333 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 OR2T29Q8NH02 315 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 CLHC1Q8NHS4 586 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 PDCD6IPQ8WUM4 868 aaKnown RBP4.45□□□□□ -1.7
RFC1-217ENST00000639695 CIB1Q99828 191 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 ACBD6Q9BR61 282 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 OSBPL11Q9BXB4 747 aa4.45□□□□□ -1.7
RFC1-217ENST00000639695 SLIRPQ9GZT3 109 aaKnown RBP4.45□□□□□ -1.7
RFC1-217ENST00000639695 CDC42EP4Q9H3Q1 356 aaKnown RBP4.45□□□□□ -1.7
RFC1-217ENST00000639695 IGLV11-55A0A075B6I3 123 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 A0A0A6YYD5 115 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 IGHV3-74A0A0B4J1X5 117 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 IGHV3OR16-9A0A0B4J2B5 98 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 A0A0B4J2E0 115 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 NKX2-6A6NCS4 301 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 MGAT4DA6NG13 374 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 SEMA3DO95025 777 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 IGKV3-15P01624 115 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 IGFBP3P17936 291 aaPredicted RBP4.44□□□□□ -1.7
RFC1-217ENST00000639695 HTR1DP28221 377 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 RANBP1P43487 201 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 UBE2AP49459 152 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 HCCSP53701 268 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 GNB2P62879 340 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 LRRC63Q05C16 580 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 SIGLEC14Q08ET2 396 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 CAPRIN1Q14444 709 aaKnown RBP4.44□□□□□ -1.7
RFC1-217ENST00000639695 DNAJC24Q6P3W2 148 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 FBXW12Q6X9E4 464 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 SSX6Q7RTT6 188 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 DAW1Q8N136 415 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 C17orf78Q8N4C9 275 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 C11orf72Q8NBR9 251 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 CCDC12Q8WUD4 166 aaPredicted RBP4.44□□□□□ -1.7
RFC1-217ENST00000639695 EXOSC8Q96B26 276 aaKnown RBP4.44□□□□□ -1.7
RFC1-217ENST00000639695 PHYHIPLQ96FC7 376 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 RNF185Q96GF1 192 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 WFIKKN1Q96NZ8 548 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 SPNS1Q9H2V7 528 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 TP53TG5Q9Y2B4 290 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 OR51B2Q9Y5P1 312 aa4.44□□□□□ -1.7
RFC1-217ENST00000639695 TRAV8-7A0A075B6U6 113 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 A6NDX4 124 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 TRAF3IP2O43734 574 aaPredicted RBP4.43□□□□□ -1.7
RFC1-217ENST00000639695 UPK1BO75841 260 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 TTC4O95801 387 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 PTTG1O95997 202 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 IGLV2-23P01705 113 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 PRPS2P11908 318 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 MYCNOSP40205 109 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 DSTNP60981 165 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 ERCC8Q13216 396 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 TNXAQ16473 311 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 ORMDL2Q53FV1 153 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 TCEAL5Q5H9L2 206 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 FAHD1Q6P587 224 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 SPATA24Q86W54 205 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 SLC30A8Q8IWU4 369 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 SPAG16Q8N0X2 631 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 Q8N9W7 124 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 MNS1Q8NEH6 495 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 BLOC1S5Q8TDH9 187 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 TCEAL3Q969E4 200 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 FAM210BQ96KR6 192 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 TIMM29Q9BSF4 260 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 TREX1Q9NSU2 369 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 SDHAF2Q9NX18 166 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 CLEC2DQ9UHP7 191 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 CACNG2Q9Y698 323 aa4.43□□□□□ -1.7
RFC1-217ENST00000639695 CARMIL3Q8ND23 1372 aa4.42□□□□□ -1.7
RFC1-217ENST00000639695 A0A1B0GUA9 196 aa4.42□□□□□ -1.7
RFC1-217ENST00000639695 TVP23AA6NH52 213 aa4.42□□□□□ -1.7
RFC1-217ENST00000639695 TRIM49D1C9J1S8 452 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 97.6 ms