RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 IFNL4K9M1U5 179 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 SELENOFO60613 162 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 SLC2A1P11166 492 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 PCMT1P22061 227 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 IGFBP5P24593 272 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 NAA10P41227 235 aaPredicted RBP13.28□□□□□ -0.28
LINC00339-207ENST00000634712 PRSS12P56730 875 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 ACTR3P61158 418 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 ZNF92Q03936 586 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 KPNB1Q14974 876 aaKnown RBP13.28□□□□□ -0.28
LINC00339-207ENST00000634712 GLYATL3Q5SZD4 288 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 LCN1P1Q5VSP4 162 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 KDM4DQ6B0I6 523 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 RHOUQ7L0Q8 258 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 GLCCI1Q86VQ1 547 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 BBS1Q8NFJ9 593 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 OR2AE1Q8NHA4 323 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 OTOSQ8NHW6 89 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 RNF133Q8WVZ7 376 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 C1orf159Q96HA4 380 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 GAL3ST1Q99999 423 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 SLC22A4Q9H015 551 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 OPA3Q9H6K4 179 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 ZNF665Q9H7R5 613 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 LPAR2Q9HBW0 351 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 DNAJC27Q9NZQ0 273 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 LAMP5Q9UJQ1 280 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 NPTNQ9Y639 398 aa13.28□□□□□ -0.28
LINC00339-207ENST00000634712 ANK3Q12955 4377 aaKnown RBP13.27□□□□□ -0.28
LINC00339-207ENST00000634712 CD300LBA8K4G0 201 aa13.27□□□□□ -0.29
LINC00339-207ENST00000634712 H0YL77 283 aa13.27□□□□□ -0.29
LINC00339-207ENST00000634712 XRCC2O43543 280 aa13.27□□□□□ -0.29
LINC00339-207ENST00000634712 SBK2P0C263 348 aa13.27□□□□□ -0.29
LINC00339-207ENST00000634712 LMO4P61968 165 aa13.27□□□□□ -0.29
LINC00339-207ENST00000634712 TIGD6Q17RP2 521 aa13.27□□□□□ -0.29
LINC00339-207ENST00000634712 FAM120AOSQ5T036 256 aa13.27□□□□□ -0.29
LINC00339-207ENST00000634712 ZFP1Q6P2D0 407 aa13.27□□□□□ -0.29
LINC00339-207ENST00000634712 OR51F2Q8NH61 342 aa13.27□□□□□ -0.29
LINC00339-207ENST00000634712 MEGF10Q96KG7 1140 aa13.27□□□□□ -0.29
LINC00339-207ENST00000634712 TEAD3Q99594 435 aa13.27□□□□□ -0.29
LINC00339-207ENST00000634712 REPIN1Q9BWE0 567 aaKnown RBP13.27□□□□□ -0.29
LINC00339-207ENST00000634712 BRD7Q9NPI1 651 aa13.27□□□□□ -0.29
LINC00339-207ENST00000634712 UBAP1Q9NZ09 502 aa13.27□□□□□ -0.29
LINC00339-207ENST00000634712 TMEFF2Q9UIK5 374 aaPredicted RBP13.27□□□□□ -0.29
LINC00339-207ENST00000634712 OAZ3Q9UMX2 235 aa13.27□□□□□ -0.29
LINC00339-207ENST00000634712 PCDHB10Q9UN67 800 aa13.27□□□□□ -0.29
LINC00339-207ENST00000634712 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.27□□□□□ -0.29
LINC00339-207ENST00000634712 DYSFO75923 2080 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 ABCA2Q9BZC7 2435 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 SAC3D1A6NKF1 404 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 FAM157AC9JC47 383 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 F5H5P2 479 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 PRKYO43930 277 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 HLA-DPB1P04440 258 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 FAM157CP0CG43 387 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 SLC2A5P22732 501 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 DVL1P1P54792 670 aaPredicted RBP13.26□□□□□ -0.29
LINC00339-207ENST00000634712 OR8G1Q15617 311 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 CR1LQ2VPA4 569 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 SLX4IPQ5VYV7 408 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 FAM57BQ71RH2 274 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 ZNF771Q7L3S4 317 aaPredicted RBP13.26□□□□□ -0.29
LINC00339-207ENST00000634712 SLC16A9Q7RTY1 509 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 KRT77Q7Z794 578 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 TCEANCQ8N8B7 351 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 PGAM5Q96HS1 289 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 RAB3IPQ96QF0 476 aaPredicted RBP13.26□□□□□ -0.29
LINC00339-207ENST00000634712 AMELYQ99218 206 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 CIB1Q99828 191 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 RBM4BQ9BQ04 359 aaKnown RBP13.26□□□□□ -0.29
LINC00339-207ENST00000634712 OSBPL10Q9BXB5 764 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 YIPF3Q9GZM5 350 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 OR10A2Q9H208 303 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 GCM1Q9NP62 436 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 ORC6Q9Y5N6 252 aa13.26□□□□□ -0.29
LINC00339-207ENST00000634712 LRRC30A6NM36 301 aa13.25□□□□□ -0.29
LINC00339-207ENST00000634712 ZAR1LA6NP61 321 aa13.25□□□□□ -0.29
LINC00339-207ENST00000634712 MLNRO43193 412 aa13.25□□□□□ -0.29
LINC00339-207ENST00000634712 MSMBP08118 114 aa13.25□□□□□ -0.29
LINC00339-207ENST00000634712 IRF2P14316 349 aa13.25□□□□□ -0.29
LINC00339-207ENST00000634712 SRD5A1P18405 259 aa13.25□□□□□ -0.29
LINC00339-207ENST00000634712 CA6P23280 308 aa13.25□□□□□ -0.29
LINC00339-207ENST00000634712 CFL1P23528 166 aaKnown RBP13.25□□□□□ -0.29
LINC00339-207ENST00000634712 OPRL1P41146 370 aa13.25□□□□□ -0.29
LINC00339-207ENST00000634712 ZNF121P58317 390 aaPredicted RBP13.25□□□□□ -0.29
LINC00339-207ENST00000634712 KCTD18Q6PI47 426 aaPredicted RBP13.25□□□□□ -0.29
LINC00339-207ENST00000634712 MEPCEQ7L2J0 689 aaKnown RBP13.25□□□□□ -0.29
LINC00339-207ENST00000634712 MOGAT3Q86VF5 341 aa13.25□□□□□ -0.29
LINC00339-207ENST00000634712 PRIMA1Q86XR5 153 aa13.25□□□□□ -0.29
LINC00339-207ENST00000634712 OR52H1Q8NGJ2 320 aa13.25□□□□□ -0.29
LINC00339-207ENST00000634712 TMEM186Q96B77 213 aa13.25□□□□□ -0.29
LINC00339-207ENST00000634712 RIBC2Q9H4K1 309 aa13.25□□□□□ -0.29
LINC00339-207ENST00000634712 HIF1ANQ9NWT6 349 aa13.25□□□□□ -0.29
LINC00339-207ENST00000634712 TMEM14AQ9Y6G1 99 aa13.25□□□□□ -0.29
LINC00339-207ENST00000634712 IGHV3-64DA0A0J9YX35 117 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 ANKRD30BLA7E2S9 258 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 GMDSO60547 372 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 IGHV2-5P01817 119 aa13.24□□□□□ -0.29
LINC00339-207ENST00000634712 MRPL3P09001 348 aaKnown RBP13.24□□□□□ -0.29
LINC00339-207ENST00000634712 EPHA2P29317 976 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms