RNA–Protein interactions for RNA: ENST00000623007.3

LDB3-208, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-208ENST00000623007 LRRC18Q8N456 261 aa14.37□□□□□ -0.11
LDB3-208ENST00000623007 OR1F12Q8NHA8 337 aa14.37□□□□□ -0.11
LDB3-208ENST00000623007 ZNF845Q96IR2 970 aaPredicted RBP14.37□□□□□ -0.11
LDB3-208ENST00000623007 HES7Q9BYE0 225 aa14.37□□□□□ -0.11
LDB3-208ENST00000623007 SLC6A15Q9H2J7 730 aa14.37□□□□□ -0.11
LDB3-208ENST00000623007 DCDC2BA2VCK2 349 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 A6NL46 340 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 LDLRAD4O15165 306 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 SYNGR3O43761 229 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 DOK2O60496 412 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 COX5BP10606 129 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 SPOCK1Q08629 439 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 MADCAM1Q13477 382 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 OTOGLQ3ZCN5 2332 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.36□□□□□ -0.11
LDB3-208ENST00000623007 SIAH3Q8IW03 269 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 ABHD3Q8WU67 409 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 FAM122AQ96E09 287 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 MMP28Q9H239 520 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 MOV10Q9HCE1 1003 aaKnown RBP14.36□□□□□ -0.11
LDB3-208ENST00000623007 V9GYS6 101 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 WDFY4Q6ZS81 3184 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 TMEM272A0A1B0GTI8 110 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 A0A1B0GVC2 190 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 ANKRD20A5PA0PJZ0 165 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 A6NIN4 97 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 F5H5K5 113 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 H7C417 338 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 CRYGSP22914 178 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 HOXD11P31277 338 aaPredicted RBP14.36□□□□□ -0.11
LDB3-208ENST00000623007 PRSS3P35030 304 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 ZNF93P35789 620 aaPredicted RBP14.36□□□□□ -0.11
LDB3-208ENST00000623007 EIF2B2P49770 351 aaKnown RBP14.36□□□□□ -0.11
LDB3-208ENST00000623007 TATDN3Q17R31 274 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 OLFML2AQ68BL7 652 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 OR14K1Q8NGZ2 314 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 APH1AQ96BI3 265 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 FBXO17Q96EF6 278 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 TECTBQ96PL2 329 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 ATG5Q9H1Y0 275 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 MTFP1Q9UDX5 166 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 ZNF221Q9UK13 617 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 CACNA1CQ13936 2221 aa14.36□□□□□ -0.11
LDB3-208ENST00000623007 CACNA1HO95180 2353 aa14.35□□□□□ -0.11
LDB3-208ENST00000623007 PTPRBP23467 1997 aa14.35□□□□□ -0.11
LDB3-208ENST00000623007 LANCL1O43813 399 aa14.35□□□□□ -0.11
LDB3-208ENST00000623007 PRAF2O60831 178 aa14.35□□□□□ -0.11
LDB3-208ENST00000623007 CEACAM4O75871 244 aa14.35□□□□□ -0.11
LDB3-208ENST00000623007 CHRM2P08172 466 aa14.35□□□□□ -0.11
LDB3-208ENST00000623007 EIF2S3P41091 472 aaKnown RBP14.35□□□□□ -0.11
LDB3-208ENST00000623007 SRYQ05066 204 aa14.35□□□□□ -0.11
LDB3-208ENST00000623007 KRTAP27-1Q3LI81 207 aa14.35□□□□□ -0.11
LDB3-208ENST00000623007 ZC3HAV1Q7Z2W4 902 aaKnown RBP14.35□□□□□ -0.11
LDB3-208ENST00000623007 OR52I2Q8NH67 350 aa14.35□□□□□ -0.11
LDB3-208ENST00000623007 OR56B4Q8NH76 319 aa14.35□□□□□ -0.11
LDB3-208ENST00000623007 FAM46BQ96A09 425 aa14.35□□□□□ -0.11
LDB3-208ENST00000623007 ADAT3Q96EY9 351 aaPredicted RBP14.35□□□□□ -0.11
LDB3-208ENST00000623007 ALKBH3Q96Q83 286 aaPredicted RBP14.35□□□□□ -0.11
LDB3-208ENST00000623007 CACNG6Q9BXT2 260 aa14.35□□□□□ -0.11
LDB3-208ENST00000623007 UPB1Q9UBR1 384 aa14.35□□□□□ -0.11
LDB3-208ENST00000623007 AHCTF1Q8WYP5 2266 aa14.35□□□□□ -0.11
LDB3-208ENST00000623007 CIB4A0PJX0 185 aa14.34□□□□□ -0.11
LDB3-208ENST00000623007 H3BSH0 61 aa14.34□□□□□ -0.11
LDB3-208ENST00000623007 BOLA2-SMG1P6H3BVE0 249 aa14.34□□□□□ -0.11
LDB3-208ENST00000623007 NKX2-8O15522 239 aa14.34□□□□□ -0.11
LDB3-208ENST00000623007 IGHG3P01860 377 aa14.34□□□□□ -0.11
LDB3-208ENST00000623007 TCRBP04435 133 aa14.34□□□□□ -0.11
LDB3-208ENST00000623007 CELA3AP09093 270 aa14.34□□□□□ -0.11
LDB3-208ENST00000623007 ARL6IP1Q15041 203 aa14.34□□□□□ -0.11
LDB3-208ENST00000623007 BTN2A1Q7KYR7 527 aa14.34□□□□□ -0.11
LDB3-208ENST00000623007 FGD2Q7Z6J4 655 aa14.34□□□□□ -0.11
LDB3-208ENST00000623007 VASH2Q86V25 355 aa14.34□□□□□ -0.11
LDB3-208ENST00000623007 UBE2J2Q8N2K1 259 aa14.34□□□□□ -0.11
LDB3-208ENST00000623007 OR51A2Q8NGJ7 313 aa14.34□□□□□ -0.11
LDB3-208ENST00000623007 KCNG3Q8TAE7 436 aa14.34□□□□□ -0.11
LDB3-208ENST00000623007 XRCC2O43543 280 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 LPLP06858 475 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 ADRB1P08588 477 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 PRF1P14222 555 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 B4GALT1P15291 398 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 ZNF32P17041 273 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 ARR3P36575 388 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 RFC3P40938 356 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 ALDH3B1P43353 468 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 CCL11P51671 97 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 SF3B4Q15427 424 aaKnown RBP eCLIP14.33□□□□□ -0.11
LDB3-208ENST00000623007 ZBTB37Q5TC79 503 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 OR13C9Q8NGT0 318 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 AKAP1Q92667 903 aaKnown RBP eCLIP14.33□□□□□ -0.11
LDB3-208ENST00000623007 SPSB1Q96BD6 273 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 UPRTQ96BW1 309 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 FAM71F1Q96KD3 344 aaPredicted RBP14.33□□□□□ -0.11
LDB3-208ENST00000623007 TRAF4Q9BUZ4 470 aaPredicted RBP14.33□□□□□ -0.11
LDB3-208ENST00000623007 OR2H1Q9GZK4 316 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 CHST5Q9GZS9 411 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 CNTD2Q9H8S5 307 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 FAM86C1Q9NVL1 165 aa14.33□□□□□ -0.11
LDB3-208ENST00000623007 VPS13AQ96RL7 3174 aa14.33□□□□□ -0.12
LDB3-208ENST00000623007 HCKP08631 526 aa14.33□□□□□ -0.12
LDB3-208ENST00000623007 ATP1A1-AS1Q5TC04 95 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms