RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 SCN3AQ9NY46 2000 aa10.57□□□□□ -0.72
CLTC-215ENST00000621829 PAX5Q02548 391 aa10.57□□□□□ -0.72
CLTC-215ENST00000621829 STAC2Q6ZMT1 411 aa10.57□□□□□ -0.72
CLTC-215ENST00000621829 H1FXQ92522 213 aaKnown RBP10.57□□□□□ -0.72
CLTC-215ENST00000621829 RGP1Q92546 391 aaPredicted RBP10.57□□□□□ -0.72
CLTC-215ENST00000621829 TBX15Q96SF7 602 aa10.57□□□□□ -0.72
CLTC-215ENST00000621829 MCTS1Q9ULC4 181 aaKnown RBP10.57□□□□□ -0.72
CLTC-215ENST00000621829 LMO7Q8WWI1 1683 aa10.57□□□□□ -0.72
CLTC-215ENST00000621829 TOX3O15405 576 aaPredicted RBP10.57□□□□□ -0.72
CLTC-215ENST00000621829 CA12O43570 354 aa10.57□□□□□ -0.72
CLTC-215ENST00000621829 ELAVL3Q14576 367 aaKnown RBP10.57□□□□□ -0.72
CLTC-215ENST00000621829 ZNF77Q15935 545 aa10.57□□□□□ -0.72
CLTC-215ENST00000621829 CCL14Q16627 93 aa10.57□□□□□ -0.72
CLTC-215ENST00000621829 TRNP1Q6NT89 227 aa10.57□□□□□ -0.72
CLTC-215ENST00000621829 C15orf39Q6ZRI6 1047 aa10.57□□□□□ -0.72
CLTC-215ENST00000621829 HSD11B1LQ7Z5J1 315 aa10.57□□□□□ -0.72
CLTC-215ENST00000621829 TCEAL8Q8IYN2 117 aa10.57□□□□□ -0.72
CLTC-215ENST00000621829 MUC20Q8N307 709 aaPredicted RBP10.57□□□□□ -0.72
CLTC-215ENST00000621829 NDFIP1Q9BT67 221 aa10.57□□□□□ -0.72
CLTC-215ENST00000621829 IKZF5Q9H5V7 419 aa10.57□□□□□ -0.72
CLTC-215ENST00000621829 SELENOPP49908 381 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 SSX1Q16384 188 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 FBXL6Q8N531 539 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 GPR137Q96N19 417 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 EDEM2Q9BV94 578 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 GLIPR2Q9H4G4 154 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 LPAR3Q9UBY5 353 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 SEMA7AO75326 666 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 BCL6P41182 706 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 HINT1P49773 126 aaPredicted RBP10.56□□□□□ -0.72
CLTC-215ENST00000621829 DLK1P80370 383 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 GPM6BQ13491 265 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 ZNF880Q6PDB4 577 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 MARCH3Q86UD3 253 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 SCCPDHQ8NBX0 429 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 TMEM38AQ9H6F2 299 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 LOC107986453A0A1B0GWG9 222 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 RNF224P0DH78 156 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 CTSAP10619 480 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 PTHLHP12272 177 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 GNG4P50150 75 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 CNN1P51911 297 aaKnown RBP10.56□□□□□ -0.72
CLTC-215ENST00000621829 TMEM251Q8N6I4 163 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 SIRT6Q8N6T7 355 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 SMIM19Q96E16 107 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 ARHGAP9Q9BRR9 750 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 HOXA10P31260 410 aaPredicted RBP10.56□□□□□ -0.72
CLTC-215ENST00000621829 INHBEP58166 350 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 HES1Q14469 280 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 OTPQ5XKR4 325 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 LEMD1Q68G75 181 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 TGIF2LXQ8IUE1 241 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 CLSTN3Q9BQT9 956 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 GABARAPL1Q9H0R8 117 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 COX7A2P2O60397 106 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 GLSO94925 669 aaPredicted RBP10.56□□□□□ -0.72
CLTC-215ENST00000621829 CST4P01036 141 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 SMIM17P0DL12 118 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 GDF1P27539 372 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 SLC35G1Q2M3R5 365 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 DMRTC1Q5HYR2 192 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 LRFN3Q9BTN0 628 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 HINT3Q9NQE9 182 aaKnown RBP10.56□□□□□ -0.72
CLTC-215ENST00000621829 IL17CQ9P0M4 197 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 OR51B4Q9Y5P0 310 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 SUB1P53999 127 aaKnown RBP eCLIP10.56□□□□□ -0.722e-8■■■■■ 82.6
CLTC-215ENST00000621829 SP6Q3SY56 376 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 AFMIDQ63HM1 303 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 TMEM65Q6PI78 240 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 OR52L2PQ8NGH6 319 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 SEC11CQ9BY50 192 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 MRPL13Q9BYD1 178 aaKnown RBP10.56□□□□□ -0.72
CLTC-215ENST00000621829 TCRBV5S2A0A599 114 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 GAGE10A6NGK3 116 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 OR4C46A6NHA9 309 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 FOXE1O00358 373 aaPredicted RBP10.56□□□□□ -0.72
CLTC-215ENST00000621829 TAPBPO15533 448 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 PLRG1O43660 514 aaKnown RBP10.56□□□□□ -0.72
CLTC-215ENST00000621829 CSN3P07498 182 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 ZNF816Q0VGE8 651 aaPredicted RBP10.56□□□□□ -0.72
CLTC-215ENST00000621829 SKP2Q13309 424 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 ATP6V1FQ16864 119 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 AGBL4Q5VU57 503 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 CLEC14AQ86T13 490 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 CARFQ8N187 725 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 OR51E1Q8TCB6 317 aa10.56□□□□□ -0.72
CLTC-215ENST00000621829 C4AP0C0L4 1744 aa10.55□□□□□ -0.72
CLTC-215ENST00000621829 C4BP0C0L5 1744 aa10.55□□□□□ -0.72
CLTC-215ENST00000621829 IL5P05113 134 aa10.55□□□□□ -0.72
CLTC-215ENST00000621829 GLB1P16278 677 aa10.55□□□□□ -0.72
CLTC-215ENST00000621829 SMIM4Q8WVI0 70 aa10.55□□□□□ -0.72
CLTC-215ENST00000621829 SLC35A4Q96G79 324 aa10.55□□□□□ -0.72
CLTC-215ENST00000621829 SNED1Q8TER0 1413 aa10.55□□□□□ -0.72
CLTC-215ENST00000621829 SPTBP11277 2137 aa10.55□□□□□ -0.72
CLTC-215ENST00000621829 ZNF840PA6NDX5 716 aa10.55□□□□□ -0.72
CLTC-215ENST00000621829 FZD6O60353 706 aa10.55□□□□□ -0.72
CLTC-215ENST00000621829 HTR1DP28221 377 aa10.55□□□□□ -0.72
CLTC-215ENST00000621829 BPIFA4PQ86YQ2 179 aa10.55□□□□□ -0.72
CLTC-215ENST00000621829 A0A1W2PPE2 198 aa10.55□□□□□ -0.72
CLTC-215ENST00000621829 CD14P08571 375 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms