RNA–Protein interactions for RNA: ENST00000618441.5

MATR3-227, Transcript of matrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MATR3, Length 4,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-227ENST00000618441 URM1Q9BTM9 101 aaKnown RBP11.05□□□□□ -0.64
MATR3-227ENST00000618441 SLC25A31Q9H0C2 315 aa11.05□□□□□ -0.64
MATR3-227ENST00000618441 CYTL1Q9NRR1 136 aa11.05□□□□□ -0.64
MATR3-227ENST00000618441 RP1L1Q8IWN7 2480 aaPredicted RBP11.05□□□□□ -0.64
MATR3-227ENST00000618441 NYNRINQ9P2P1 1898 aaKnown RBP11.05□□□□□ -0.64
MATR3-227ENST00000618441 FRKP42685 505 aaPredicted RBP11.05□□□□□ -0.64
MATR3-227ENST00000618441 ACAA2P42765 397 aaKnown RBP11.05□□□□□ -0.64
MATR3-227ENST00000618441 ERVFRD-1P60508 538 aa11.05□□□□□ -0.64
MATR3-227ENST00000618441 RAB1AP62820 205 aa11.05□□□□□ -0.64
MATR3-227ENST00000618441 MRPL49Q13405 166 aaKnown RBP11.05□□□□□ -0.64
MATR3-227ENST00000618441 ZNF480Q8WV37 535 aa11.05□□□□□ -0.64
MATR3-227ENST00000618441 HAS2Q92819 552 aa11.05□□□□□ -0.64
MATR3-227ENST00000618441 GALNT14Q96FL9 552 aa11.05□□□□□ -0.64
MATR3-227ENST00000618441 ZNF426Q9BUY5 554 aa11.05□□□□□ -0.64
MATR3-227ENST00000618441 METTL7AQ9H8H3 244 aa11.05□□□□□ -0.64
MATR3-227ENST00000618441 FBXL17Q9UF56 701 aa11.05□□□□□ -0.64
MATR3-227ENST00000618441 PTPRZ1P23471 2315 aaPredicted RBP11.04□□□□□ -0.64
MATR3-227ENST00000618441 ANK1P16157 1881 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 A0A1W2PS29 197 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 TLE4Q04727 773 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 ERASQ7Z444 233 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 CAMKMTQ7Z624 323 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 CASD1Q96PB1 797 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 COMMD4Q9H0A8 199 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 GLIPR2Q9H4G4 154 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 MED31Q9Y3C7 131 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 F5P12259 2224 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 ELOA3CA0A087WX78 387 aaPredicted RBP11.04□□□□□ -0.64
MATR3-227ENST00000618441 XKRYO14609 159 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 ITGB2P05107 769 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 IRF2P14316 349 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 IL9P15248 144 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 PPP1CCP36873 323 aaKnown RBP11.04□□□□□ -0.64
MATR3-227ENST00000618441 CLDN6P56747 220 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 RPS11P62280 158 aaKnown RBP eCLIP11.04□□□□□ -0.64
MATR3-227ENST00000618441 SPOCK1Q08629 439 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 VITQ6UXI7 678 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 Q6ZVL8 140 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 TRAPPC6BQ86SZ2 158 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 CLEC1AQ8NC01 280 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 M1APQ8TC57 530 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 DIO2Q92813 273 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 PRAP1Q96NZ9 151 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 CITED2Q99967 270 aaPredicted RBP11.04□□□□□ -0.64
MATR3-227ENST00000618441 SLC5A7Q9GZV3 580 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 CALCBP10092 127 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 CD33P20138 364 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 HRH1P35367 487 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 MC3RP41968 323 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 Q499Y3 187 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.04□□□□□ -0.644e-12■■■□□ 15.3
MATR3-227ENST00000618441 SLC24A5Q71RS6 500 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 SYT13Q7L8C5 426 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 TMEM123Q8N131 208 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 TRAM1L1Q8N609 369 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 OR6N2Q8NGY6 317 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 FIBINQ8TAL6 211 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 EFCAB11Q9BUY7 163 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 SGPP1Q9BX95 441 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 INPP5EQ9NRR6 644 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 TMEM100Q9NV29 134 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 WDR81Q562E7 1941 aa11.04□□□□□ -0.64
MATR3-227ENST00000618441 RTTNQ86VV8 2226 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 HEATR5AQ86XA9 2040 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 DBIP07108 87 aaKnown RBP11.03□□□□□ -0.64
MATR3-227ENST00000618441 CYCSP99999 105 aaKnown RBP11.03□□□□□ -0.64
MATR3-227ENST00000618441 EGR3Q06889 387 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 TCEAL5Q5H9L2 206 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 SEH1LQ96EE3 360 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 SF3B5Q9BWJ5 86 aaKnown RBP11.03□□□□□ -0.64
MATR3-227ENST00000618441 SLC17A9Q9BYT1 436 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 PCED1AQ9H1Q7 454 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 CMC2Q9NRP2 79 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 TAC3Q9UHF0 121 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 PAM16Q9Y3D7 125 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 HDGFL3Q9Y3E1 203 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 CDRT15L2A8MXV6 281 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 H7C1C5 153 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 RPLP2P05387 115 aaKnown RBP11.03□□□□□ -0.64
MATR3-227ENST00000618441 HIST1H1CP16403 213 aaKnown RBP11.03□□□□□ -0.64
MATR3-227ENST00000618441 RPL12P30050 165 aaKnown RBP11.03□□□□□ -0.64
MATR3-227ENST00000618441 CEACAM8P31997 349 aaPredicted RBP11.03□□□□□ -0.64
MATR3-227ENST00000618441 OR1D2P34982 312 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 LCN6P62502 163 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 BTG2P78543 158 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 ARL6IP1Q15041 203 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 CLLU1OSQ5K130 101 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 WDR25Q64LD2 544 aaPredicted RBP11.03□□□□□ -0.64
MATR3-227ENST00000618441 C5orf24Q7Z6I8 188 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 RCBTB1Q8NDN9 531 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 SP7Q8TDD2 431 aaPredicted RBP11.03□□□□□ -0.64
MATR3-227ENST00000618441 KISS1RQ969F8 398 aaPredicted RBP11.03□□□□□ -0.64
MATR3-227ENST00000618441 RNF126Q9BV68 326 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 ANKRD10Q9NXR5 420 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 EYSQ5T1H1 3165 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 PLPP1O14494 284 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 XRCC2O43543 280 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 SERPINA4P29622 427 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 PDX1P52945 283 aa11.03□□□□□ -0.64
MATR3-227ENST00000618441 ID2Q02363 134 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms