RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 ZSCAN1Q8NBB4 408 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 CADM4Q8NFZ8 388 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 MARC2Q969Z3 335 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 OXGR1Q96P68 337 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 MFRPQ9BY79 579 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 METTL9Q9H1A3 318 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 GAREM1Q9H706 876 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 LANCL2Q9NS86 450 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 PIGLQ9Y2B2 252 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 UBE2J1Q9Y385 318 aaPredicted RBP7.77□□□□□ -1.17
LIG4-204ENST00000611712 CENPFP49454 3210 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 PLXND1Q9Y4D7 1925 aa7.77□□□□□ -1.17
LIG4-204ENST00000611712 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 HMSDA8MTL9 139 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 RER1O15258 196 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 EIF1BO60739 113 aaKnown RBP7.76□□□□□ -1.17
LIG4-204ENST00000611712 RBMXL2O75526 392 aaKnown RBP7.76□□□□□ -1.17
LIG4-204ENST00000611712 MSR1P21757 451 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 HOXD11P31277 338 aaPredicted RBP7.76□□□□□ -1.17
LIG4-204ENST00000611712 PPP1R1AQ13522 171 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 ZNF169Q14929 603 aaPredicted RBP7.76□□□□□ -1.17
LIG4-204ENST00000611712 EXOSC6Q5RKV6 272 aaKnown RBP7.76□□□□□ -1.17
LIG4-204ENST00000611712 LRRC46Q96FV0 321 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 ADAM19Q9H013 955 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 SLC25A32Q9H2D1 315 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 UBE2ZQ9H832 354 aaPredicted RBP7.76□□□□□ -1.17
LIG4-204ENST00000611712 RP1P56715 2156 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 RTTNQ86VV8 2226 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 A0A087WV48 116 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 TPPPO94811 219 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 DIRAS3O95661 229 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 CXCL2P19875 107 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 HTR5AP47898 357 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 RPS15P62841 145 aaKnown RBP7.76□□□□□ -1.17
LIG4-204ENST00000611712 PLP2Q04941 152 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 MPPED2Q15777 294 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 LPAL2Q16609 132 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 IAH1Q2TAA2 248 aaPredicted RBP7.76□□□□□ -1.17
LIG4-204ENST00000611712 TMEM255AQ5JRV8 349 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 FAM209AQ5JX71 171 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 TMEM164Q5U3C3 297 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 C11orf87Q6NUJ2 197 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 MEX3BQ6ZN04 569 aaKnown RBP7.76□□□□□ -1.17
LIG4-204ENST00000611712 PRSS42Q7Z5A4 293 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 SVBPQ8N300 66 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 RNF141Q8WVD5 230 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 TMED6Q8WW62 240 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 PIGCQ92535 297 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 CXorf58Q96LI9 332 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 PARPBPQ9NWS1 579 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 SIT1Q9Y3P8 196 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 IGHV3-15A0A0B4J1V0 119 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 HSPA12AO43301 675 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 LAMTOR5O43504 91 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 TSPAN15O95858 294 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 GUSBP08236 651 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 GABRA1P14867 456 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 SMAD4Q13485 552 aaKnown RBP7.76□□□□□ -1.17
LIG4-204ENST00000611712 PPA1Q15181 289 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 CNN3Q15417 329 aaKnown RBP7.76□□□□□ -1.17
LIG4-204ENST00000611712 PCK2Q16822 640 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 AAED1Q7RTV5 226 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 ANKRD37Q7Z713 158 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 TDHQ8IZJ6 230 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 GPX8Q8TED1 209 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 MS4A3Q96HJ5 214 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 UCK1Q9HA47 277 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 PCDHGA1Q9Y5H4 931 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 WIF1Q9Y5W5 379 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 ABCA7Q8IZY2 2146 aa7.76□□□□□ -1.17
LIG4-204ENST00000611712 K7EPK0 472 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 MED6O75586 246 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 SYNGR4O95473 234 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 MPC2O95563 127 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 CAMLGP49069 296 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 CAMK2BQ13554 666 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 ATPAF1Q5TC12 328 aaPredicted RBP7.75□□□□□ -1.17
LIG4-204ENST00000611712 RTL6Q6ICC9 239 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 RPS19BP1Q86WX3 136 aaKnown RBP7.75□□□□□ -1.17
LIG4-204ENST00000611712 D2HGDHQ8N465 521 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 FAM71E2Q8N5Q1 922 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 NOXO1Q8NFA2 376 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 TERB2Q8NHR7 220 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 ASB10Q8WXI3 467 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 ASB13Q8WXK3 278 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 RGCCQ9H4X1 137 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 NXT1Q9UKK6 140 aaKnown RBP7.75□□□□□ -1.17
LIG4-204ENST00000611712 HRH3Q9Y5N1 445 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 MRPS18BQ9Y676 258 aaKnown RBP7.75□□□□□ -1.17
LIG4-204ENST00000611712 PLXNB3Q9ULL4 1909 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 TRBV5-7A0A0A0MS05 114 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 OR7C1O76099 320 aaPredicted RBP7.75□□□□□ -1.17
LIG4-204ENST00000611712 DXOO77932 396 aaKnown RBP7.75□□□□□ -1.17
LIG4-204ENST00000611712 DBHP09172 617 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 ZNF806P0C7X5 589 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 TBPP20226 339 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 NME2P22392 152 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 CAV2P51636 162 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 ATP1B3P54709 279 aa7.75□□□□□ -1.17
LIG4-204ENST00000611712 C9orf135Q5VTT2 229 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms