RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 M0R1B8 84 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 RPP14O95059 124 aaKnown RBP8.77□□□□□ -1.01
UPF1-213ENST00000601981 ZFPL1O95159 310 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 THBDP07204 575 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 CD3EP07766 207 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 CST2P09228 141 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 PTAFRP25105 342 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 CALRP27797 417 aaKnown RBP8.77□□□□□ -1.01
UPF1-213ENST00000601981 FAM27BQ5VT28 67 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 LRRN1Q6UXK5 716 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 DCXRQ7Z4W1 244 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 TMEM200AQ86VY9 491 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 LRRC18Q8N456 261 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 FAM169BQ8N8A8 192 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 WDR31Q8NA23 367 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 IL17RDQ8NFM7 739 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 OR5AK2Q8NH90 309 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 RNF133Q8WVZ7 376 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 RGP1Q92546 391 aaPredicted RBP8.77□□□□□ -1.01
UPF1-213ENST00000601981 PIK3IP1Q96FE7 263 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 RADILQ96JH8 1075 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 WDFY2Q96P53 400 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 PDCD1LG2Q9BQ51 273 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 COMMD4Q9H0A8 199 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 C1orf198Q9H425 327 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 POLE4Q9NR33 117 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 FRRS1LQ9P0K9 344 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 CYB5R1Q9UHQ9 305 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 UGT2A1Q9Y4X1 527 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 LRP12Q9Y561 859 aa8.77□□□□□ -1.01
UPF1-213ENST00000601981 CADP27708 2225 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 TRBV5-5A0A0J9YX44 114 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.76□□□□□ -1.01
UPF1-213ENST00000601981 ANKRD61A6NGH8 418 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 ZNF879B4DU55 563 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 HLA-HP01893 362 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 CRYAAP02489 173 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 CBR1P16152 277 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 MAPK3P27361 379 aaPredicted RBP8.76□□□□□ -1.01
UPF1-213ENST00000601981 CD40LGP29965 261 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 CDAP32320 146 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 DCTDP32321 178 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 KIR3DL2P43630 455 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 ZNF83P51522 516 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 LSM6P62312 80 aaKnown RBP8.76□□□□□ -1.01
UPF1-213ENST00000601981 RAB1AP62820 205 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 ZNF45Q02386 682 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 TLE4Q04727 773 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 SCRN3Q0VDG4 424 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 HSD17B12Q53GQ0 312 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 OTPQ5XKR4 325 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 RHOUQ7L0Q8 258 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 SYT9Q86SS6 491 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 CCDC190Q86UF4 302 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 CATSPERDQ86XM0 798 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 LINC00346Q8IVM7 164 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 PRSS35Q8N3Z0 413 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 OR1J2Q8NGS2 313 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 OR13C5Q8NGS8 318 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 ACOT12Q8WYK0 555 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 KCTD12Q96CX2 325 aaKnown RBP8.76□□□□□ -1.01
UPF1-213ENST00000601981 PLPPR2Q96GM1 343 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 SH3GL3Q99963 347 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 TPK1Q9H3S4 243 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 EDARQ9UNE0 448 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 LHFPL6Q9Y693 200 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 R4GMQ9 66 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 CACNA1DQ01668 2161 aa8.76□□□□□ -1.01
UPF1-213ENST00000601981 J3QRK9 145 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 SRSF10O75494 262 aaKnown RBP8.75□□□□□ -1.01
UPF1-213ENST00000601981 IGKV3-15P01624 115 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 H2BFMP0C1H6 154 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 IDH3GP51553 393 aaPredicted RBP8.75□□□□□ -1.01
UPF1-213ENST00000601981 PPP5CP53041 499 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 BSPH1Q075Z2 132 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 Q499Y3 187 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 WDR38Q5JTN6 314 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 SPANXN2Q5MJ10 180 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 NCMAPQ5T1S8 102 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 FAM27D1Q5T7N8 215 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 DDI2Q5TDH0 399 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 ZNF787Q6DD87 383 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 C16orf87Q6PH81 154 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 UNQ6126/PRO20091Q6UXV3 157 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 MDP1Q86V88 176 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 SKA3Q8IX90 412 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 ZNF676Q8N7Q3 588 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 OR2AJ1Q8NGZ0 328 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 GPR148Q8TDV2 347 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 NABP1Q96AH0 204 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 SLAMF6Q96DU3 332 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 CEP19Q96LK0 163 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 DERL3Q96Q80 235 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 OR14A2Q96R54 314 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 C1QTNF6Q9BXI9 259 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 PPIL3Q9H2H8 161 aaKnown RBP8.75□□□□□ -1.01
UPF1-213ENST00000601981 CLEC4MQ9H2X3 399 aaPredicted RBP8.75□□□□□ -1.01
UPF1-213ENST00000601981 NIPAL2Q9H841 368 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 EMC7Q9NPA0 242 aa8.75□□□□□ -1.01
UPF1-213ENST00000601981 GDF2Q9UK05 429 aaPredicted RBP8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms