RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 IQCF1Q8N6M8 205 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 OR8D4Q8NGM9 314 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 ATF6BQ99941 703 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 SYT4Q9H2B2 425 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 BHLHE40O14503 412 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 IGLV1-44P01699 117 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 HIST1H1CP16403 213 aaKnown RBP17.04■□□□□ 0.32
LSM4-203ENST00000593829 M6PRP20645 277 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 OR3A3P47888 321 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 OR4K13Q8NH42 304 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 AKAP1Q92667 903 aaKnown RBP eCLIP17.04■□□□□ 0.32
LSM4-203ENST00000593829 TMEM203Q969S6 136 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 CREB3L1Q96BA8 519 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 RNFT2Q96EX2 444 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 BEX2Q9BXY8 128 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 SEC61A2Q9H9S3 476 aa17.04■□□□□ 0.32
LSM4-203ENST00000593829 A0A0X1KG70 313 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 FAM240BA0A1B0GVZ2 78 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 CTLA4P16410 223 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 IDH3GP51553 393 aaPredicted RBP17.03■□□□□ 0.32
LSM4-203ENST00000593829 RAB1AP62820 205 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 SGCAQ16586 387 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 SLC36A2Q495M3 483 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 LEG1Q6P5S2 330 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 SLC22A25Q6T423 547 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 SLC16A14Q7RTX9 510 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 OR2T33Q8NG76 320 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 LILRB1Q8NHL6 650 aaPredicted RBP17.03■□□□□ 0.32
LSM4-203ENST00000593829 TEX47Q8TBZ9 253 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 ACOT12Q8WYK0 555 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 SNAPC3Q92966 411 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 NABP1Q96AH0 204 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 NMNAT3Q96T66 252 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 PRRG3Q9BZD7 231 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 KCNN2Q9H2S1 579 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 ST6GALNAC2Q9UJ37 374 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 BAIAP2Q9UQB8 552 aa17.03■□□□□ 0.32
LSM4-203ENST00000593829 LRBAP50851 2863 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 A0A1W2PPL8 197 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 SHISA9B4DS77 424 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 HS3ST1O14792 307 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 SLC16A7O60669 478 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 RENP00797 406 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 CECR9P0C854 216 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 LIMS3P0CW19 117 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 LIMS4P0CW20 117 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 PSKH1P11801 424 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 MTNR1AP48039 350 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 SPOCK1Q08629 439 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 RIPPLY1Q0D2K3 151 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 ETFDHQ16134 617 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 SNAPC1Q16533 368 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 ZNF672Q499Z4 452 aaPredicted RBP17.02■□□□□ 0.32
LSM4-203ENST00000593829 OR2G6Q5TZ20 316 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 LAMTOR1Q6IAA8 161 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 PAMR1Q6UXH9 720 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 ZNF782Q6ZMW2 699 aaPredicted RBP17.02■□□□□ 0.32
LSM4-203ENST00000593829 FOXL2NBQ6ZUU3 175 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 LNX2Q8N448 690 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 LRRC18Q8N456 261 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 HYLS1Q96M11 299 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 JAM3Q9BX67 310 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 RERGLQ9H628 205 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 NOX3Q9HBY0 568 aa17.02■□□□□ 0.32
LSM4-203ENST00000593829 KHDRBS3O75525 346 aaKnown RBP17.02■□□□□ 0.31
LSM4-203ENST00000593829 HLA-DPB1P04440 258 aa17.02■□□□□ 0.31
LSM4-203ENST00000593829 PATE4P0C8F1 98 aa17.02■□□□□ 0.31
LSM4-203ENST00000593829 ARSBP15848 533 aa17.02■□□□□ 0.31
LSM4-203ENST00000593829 FAM27BQ5VT28 67 aa17.02■□□□□ 0.31
LSM4-203ENST00000593829 DNM1P34Q6PK57 102 aa17.02■□□□□ 0.31
LSM4-203ENST00000593829 C20orf204Q6ZNR8 217 aa17.02■□□□□ 0.31
LSM4-203ENST00000593829 OR52E2Q8NGJ4 325 aa17.02■□□□□ 0.31
LSM4-203ENST00000593829 FGFBP3Q8TAT2 258 aa17.02■□□□□ 0.31
LSM4-203ENST00000593829 SUN5Q8TC36 379 aa17.02■□□□□ 0.31
LSM4-203ENST00000593829 UPRTQ96BW1 309 aa17.02■□□□□ 0.31
LSM4-203ENST00000593829 COMMD3Q9UBI1 195 aa17.02■□□□□ 0.31
LSM4-203ENST00000593829 FBXL3Q9UKT7 428 aa17.02■□□□□ 0.31
LSM4-203ENST00000593829 PDZD2O15018 2839 aa17.02■□□□□ 0.31
LSM4-203ENST00000593829 HPGDSO60760 199 aa17.01■□□□□ 0.31
LSM4-203ENST00000593829 CRYAAP02489 173 aa17.01■□□□□ 0.31
LSM4-203ENST00000593829 RAF1P04049 648 aa17.01■□□□□ 0.31
LSM4-203ENST00000593829 CELA3BP08861 270 aa17.01■□□□□ 0.31
LSM4-203ENST00000593829 CRABP1P29762 137 aa17.01■□□□□ 0.31
LSM4-203ENST00000593829 CDH11P55287 796 aa17.01■□□□□ 0.31
LSM4-203ENST00000593829 NAAAQ02083 359 aa17.01■□□□□ 0.31
LSM4-203ENST00000593829 SLC27A4Q6P1M0 643 aa17.01■□□□□ 0.31
LSM4-203ENST00000593829 GATAD2BQ8WXI9 593 aa17.01■□□□□ 0.31
LSM4-203ENST00000593829 NEUROG1Q92886 237 aa17.01■□□□□ 0.31
LSM4-203ENST00000593829 ZNF75AQ96N20 296 aa17.01■□□□□ 0.31
LSM4-203ENST00000593829 POLQO75417 2590 aa17.01■□□□□ 0.31
LSM4-203ENST00000593829 ESCO2Q56NI9 601 aa17■□□□□ 0.31
LSM4-203ENST00000593829 CEP78Q5JTW2 689 aa17■□□□□ 0.31
LSM4-203ENST00000593829 GLB1L2Q8IW92 636 aa17■□□□□ 0.31
LSM4-203ENST00000593829 CCDC28AQ8IWP9 274 aa17■□□□□ 0.31
LSM4-203ENST00000593829 ZNF611Q8N823 705 aa17■□□□□ 0.31
LSM4-203ENST00000593829 SDR9C7Q8NEX9 313 aa17■□□□□ 0.31
LSM4-203ENST00000593829 OR4M1Q8NGD0 313 aa17■□□□□ 0.31
LSM4-203ENST00000593829 OR4Q3Q8NH05 313 aa17■□□□□ 0.31
LSM4-203ENST00000593829 OR52N1Q8NH53 320 aa17■□□□□ 0.31
LSM4-203ENST00000593829 NINJ1Q92982 152 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms