RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 ACOXLQ9NUZ1 547 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 ERVK-18Q9QC07 812 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 SLC22A13Q9Y226 551 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 TPRKBQ9Y3C4 175 aa12.51□□□□□ -0.41
CNN1-208ENST00000588935 ICMTO60725 284 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 SULT1C4O75897 302 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 TACSTD2P09758 323 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 LIMS3P0CW19 117 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 LIMS4P0CW20 117 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 NAT2P11245 290 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 ZNF250P15622 560 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 MYL12AP19105 171 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 DCKP27707 260 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 SNRPD2P62316 118 aaKnown RBP12.5□□□□□ -0.41
CNN1-208ENST00000588935 CSNK2BP67870 215 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 MED21Q13503 144 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 GK2Q14410 553 aaPredicted RBP12.5□□□□□ -0.41
CNN1-208ENST00000588935 SWI5Q1ZZU3 235 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 CDONQ4KMG0 1287 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 ZNF684Q5T5D7 378 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 PGAP1Q75T13 922 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 PRSS45Q7RTY3 260 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 COMMD2Q86X83 199 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 BHLHE23Q8NDY6 225 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 OR8B12Q8NGG6 310 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 SPRYD4Q8WW59 207 aaPredicted RBP12.5□□□□□ -0.41
CNN1-208ENST00000588935 MYDGFQ969H8 173 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 HAVCR1Q96D42 359 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 MRPL48Q96GC5 212 aaKnown RBP12.5□□□□□ -0.41
CNN1-208ENST00000588935 COG8Q96MW5 612 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 ZNF649Q9BS31 505 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 SOX7Q9BT81 388 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 CCDC90BQ9GZT6 254 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 PBOV1Q9GZY1 135 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 TPK1Q9H3S4 243 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 SP140LQ9H930 580 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 FAM206AQ9NX38 181 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 PURGQ9UJV8 347 aaKnown RBP12.5□□□□□ -0.41
CNN1-208ENST00000588935 OR52A1Q9UKL2 312 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 ITGB1BP2Q9UKP3 347 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 DIMT1Q9UNQ2 313 aaKnown RBP12.5□□□□□ -0.41
CNN1-208ENST00000588935 R4GMQ9 66 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 PMF1-BGLAPU3KQ54 211 aa12.5□□□□□ -0.41
CNN1-208ENST00000588935 GGT3PA6NGU5 568 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 NDUFS7O75251 213 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 EEF1B2P24534 225 aaKnown RBP12.49□□□□□ -0.41
CNN1-208ENST00000588935 EFNB3Q15768 340 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 BCL2L15Q5TBC7 163 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 MBNL2Q5VZF2 373 aaKnown RBP12.49□□□□□ -0.41
CNN1-208ENST00000588935 CDH24Q86UP0 819 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 DTX2Q86UW9 622 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 C1orf174Q8IYL3 243 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 KLHL36Q8N4N3 616 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 GATAD2BQ8WXI9 593 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 RORBQ92753 470 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 PIGTQ969N2 578 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 REEP6Q96HR9 211 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 MSL2Q9HCI7 577 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 INPP5EQ9NRR6 644 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 PAK1IP1Q9NWT1 392 aaPredicted RBP12.49□□□□□ -0.41
CNN1-208ENST00000588935 CNOT2Q9NZN8 540 aaKnown RBP12.49□□□□□ -0.41
CNN1-208ENST00000588935 EDARQ9UNE0 448 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 EXOSC1Q9Y3B2 195 aaKnown RBP12.49□□□□□ -0.41
CNN1-208ENST00000588935 LRBAP50851 2863 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 ITPR2Q14571 2701 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 NOTCH2Q04721 2471 aa12.49□□□□□ -0.41
CNN1-208ENST00000588935 ASH1LQ9NR48 2969 aaKnown RBP12.48□□□□□ -0.41
CNN1-208ENST00000588935 ANKRD17O75179 2603 aaKnown RBP12.48□□□□□ -0.41
CNN1-208ENST00000588935 E9PI62 339 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 P2RY10O00398 339 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 XRCC2O43543 280 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 SPRY3O43610 288 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 LILRA1O75019 489 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 SRSF10O75494 262 aaKnown RBP12.48□□□□□ -0.41
CNN1-208ENST00000588935 IGHV3-13P01766 116 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 CDK1P06493 297 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 HTR1AP08908 422 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 PIPP12273 146 aaPredicted RBP12.48□□□□□ -0.41
CNN1-208ENST00000588935 RAC2P15153 192 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 DCTDP32321 178 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 ACTA2P62736 377 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 ACTG2P63267 376 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 C11orf71Q6IPW1 123 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 FBXW12Q6X9E4 464 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 TMPRSS11AQ6ZMR5 421 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 KCTD20Q7Z5Y7 419 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 KLBQ86Z14 1044 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 OR52H1Q8NGJ2 320 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 OR51E1Q8TCB6 317 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 PELI1Q96FA3 418 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 PERPQ96FX8 193 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 FAM71F1Q96KD3 344 aaPredicted RBP12.48□□□□□ -0.41
CNN1-208ENST00000588935 LYZL4Q96KX0 146 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 CXorf56Q9H5V9 222 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 G6PC2Q9NQR9 355 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 FKBP14Q9NWM8 211 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 SNX5Q9Y5X3 404 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 APCP25054 2843 aa12.48□□□□□ -0.41
CNN1-208ENST00000588935 FBN2P35556 2912 aa12.47□□□□□ -0.41
CNN1-208ENST00000588935 IGLV3-9A0A075B6K5 115 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms