RNA–Protein interactions for RNA: ENST00000587740.5

NCLN-203, Transcript of nicalin, humanhuman

TSL 1 (best)

Gene NCLN, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-203ENST00000587740 LPAR2Q9HBW0 351 aa13.34□□□□□ -0.27
NCLN-203ENST00000587740 DDX28Q9NUL7 540 aaKnown RBP13.34□□□□□ -0.27
NCLN-203ENST00000587740 TBCCD1Q9NVR7 557 aa13.34□□□□□ -0.27
NCLN-203ENST00000587740 DNAJC27Q9NZQ0 273 aa13.34□□□□□ -0.27
NCLN-203ENST00000587740 WARS2Q9UGM6 360 aaKnown RBP13.34□□□□□ -0.27
NCLN-203ENST00000587740 DUSP13Q9UII6 198 aa13.34□□□□□ -0.27
NCLN-203ENST00000587740 FBXO9Q9UK97 447 aaPredicted RBP13.34□□□□□ -0.27
NCLN-203ENST00000587740 MPZL2O60487 215 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 NGFP01138 241 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 AVPP01185 164 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 ERCC1P07992 297 aaPredicted RBP13.33□□□□□ -0.28
NCLN-203ENST00000587740 COL8A2P25067 703 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 GCH1P30793 250 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 HTR1FP30939 366 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 SLC15A1P46059 708 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 EVX1P49640 407 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 ERVS71-1P61550 626 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 RSPO1Q2MKA7 263 aaPredicted RBP13.33□□□□□ -0.28
NCLN-203ENST00000587740 SLC25A30Q5SVS4 291 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 MEDAGQ5VYS4 303 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 TTC23Q5W5X9 447 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 RFPL4BQ6ZWI9 263 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 DHRSXQ8N5I4 330 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 SLC25A40Q8TBP6 338 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 ZNF418Q8TF45 676 aaPredicted RBP13.33□□□□□ -0.28
NCLN-203ENST00000587740 CYGBQ8WWM9 190 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 APOL4Q9BPW4 351 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 MRPL37Q9BZE1 423 aaKnown RBP13.33□□□□□ -0.28
NCLN-203ENST00000587740 NARFLQ9H6Q4 476 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 DYNLRB1Q9NP97 96 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 HAO2Q9NYQ3 351 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 LAMP5Q9UJQ1 280 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 FZR1Q9UM11 496 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 PCDHB10Q9UN67 800 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 TMEM14AQ9Y6G1 99 aa13.33□□□□□ -0.28
NCLN-203ENST00000587740 SNTNA6NMZ2 147 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 J3QW42 95 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 M0R135 149 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 MSMBP08118 114 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 ACSM4P0C7M7 580 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 ZNF250P15622 560 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 TUBG1P23258 451 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 HSD11B1P28845 292 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 KLF3P57682 345 aaPredicted RBP13.32□□□□□ -0.28
NCLN-203ENST00000587740 GRB2P62993 217 aaKnown RBP13.32□□□□□ -0.28
NCLN-203ENST00000587740 POU4F2Q12837 409 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 TMED1Q13445 227 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 OCLNQ16625 522 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 KRTAP27-1Q3LI81 207 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 SPATA46Q5T0L3 261 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 USP43Q70EL4 1123 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 SPATC1Q76KD6 591 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 RHOUQ7L0Q8 258 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 LRP11Q86VZ4 500 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 ENTHD1Q8IYW4 607 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 OR51G2Q8NGK0 314 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 OR5L1Q8NGL2 311 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 RNF133Q8WVZ7 376 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 APOBEC3DQ96AK3 386 aaPredicted RBP13.32□□□□□ -0.28
NCLN-203ENST00000587740 ZNF799Q96GE5 643 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 KCNJ15Q99712 375 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 SYT3Q9BQG1 590 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 OR2J1Q9GZK6 312 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 TUBG2Q9NRH3 451 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.32□□□□□ -0.28
NCLN-203ENST00000587740 STARD10Q9Y365 291 aa13.32□□□□□ -0.28
NCLN-203ENST00000587740 A0A1W2PPW3 197 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 H3BSA7 217 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 TRIM77I1YAP6 450 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 ENTPD6O75354 484 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 HPXP02790 462 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 LCATP04180 440 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 H2BFMP0C1H6 154 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 ALOX5APP20292 161 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 ATP6V1E1P36543 226 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 SLC6A9P48067 706 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 HCCSP53701 268 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 RIPK1Q13546 671 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 MOGQ16653 247 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 AWAT1Q58HT5 328 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 PRR31Q5SQ13 230 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 KCTD18Q6PI47 426 aaPredicted RBP13.31□□□□□ -0.28
NCLN-203ENST00000587740 DRAM2Q6UX65 266 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.31□□□□□ -0.28
NCLN-203ENST00000587740 SLC35F2Q8IXU6 374 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 ZNF283Q8N7M2 679 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 KLF14Q8TD94 323 aaPredicted RBP13.31□□□□□ -0.28
NCLN-203ENST00000587740 MARS2Q96GW9 593 aaKnown RBP13.31□□□□□ -0.28
NCLN-203ENST00000587740 Q96MT0 163 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 AMELYQ99218 206 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 MNTQ99583 582 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 C1QTNF5Q9BXJ0 243 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 VCX3BQ9H321 246 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 CLN6Q9NWW5 311 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 SLCO1C1Q9NYB5 712 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 TREM2Q9NZC2 230 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 GPR160Q9UJ42 338 aa13.31□□□□□ -0.28
NCLN-203ENST00000587740 IGLV3-9A0A075B6K5 115 aa13.3□□□□□ -0.28
NCLN-203ENST00000587740 PHYHO14832 338 aa13.3□□□□□ -0.28
NCLN-203ENST00000587740 TMPRSS2O15393 492 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms