RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 GSK3AP49840 483 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 P2RY4P51582 365 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 PSMD7P51665 324 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 CCR9P51686 369 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 PPP5CP53041 499 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 LCN6P62502 163 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 BSPH1Q075Z2 132 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 SLC3A1Q07837 685 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 HNRNPA0Q13151 305 aaKnown RBP6.82□□□□□ -1.32
VMP1-204ENST00000587259 ALKBH1Q13686 389 aaKnown RBP6.82□□□□□ -1.32
VMP1-204ENST00000587259 TAB1Q15750 504 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 PCK2Q16822 640 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 ZNF181Q2M3W8 571 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 TP53I3Q53FA7 332 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 NCMAPQ5T1S8 102 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 ZNF684Q5T5D7 378 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 METAP1DQ6UB28 335 aaPredicted RBP6.82□□□□□ -1.32
VMP1-204ENST00000587259 SEZ6L2Q6UXD5 910 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 DPY19L4Q7Z388 723 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 KRT77Q7Z794 578 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 TUSC5Q8IXB3 177 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 ZFP41Q8N8Y5 198 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 SLC26A10Q8NG04 563 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 OR5AK2Q8NH90 309 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 OR2V1Q8NHB1 315 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 ABHD4Q8TB40 342 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 THEM6Q8WUY1 208 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 NSMAFQ92636 917 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 GHSRQ92847 366 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 FBXW5Q969U6 566 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 GMPPAQ96IJ6 420 aaPredicted RBP6.82□□□□□ -1.32
VMP1-204ENST00000587259 TSSK2Q96PF2 358 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 SH3GL3Q99963 347 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 WACQ9BTA9 647 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 CCDC32Q9BV29 185 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 HDHD5Q9BXW7 423 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 MRPL13Q9BYD1 178 aaKnown RBP6.82□□□□□ -1.32
VMP1-204ENST00000587259 B3GAT2Q9NPZ5 323 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 SNTG1Q9NSN8 517 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 ACOXLQ9NUZ1 547 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 COPS3Q9UNS2 423 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 CMAHPQ9Y471 501 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 RNF115Q9Y4L5 304 aa6.82□□□□□ -1.32
VMP1-204ENST00000587259 FREM1Q5H8C1 2179 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 A0A096LNT2 108 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 A8MV72 311 aaPredicted RBP6.81□□□□□ -1.32
VMP1-204ENST00000587259 DCTN6O00399 190 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 ZNF593O00488 134 aaPredicted RBP6.81□□□□□ -1.32
VMP1-204ENST00000587259 GPR171O14626 319 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 RGS5O15539 181 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 LYZL6O75951 148 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 LY6HO94772 140 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 SYNGR4O95473 234 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 ABHD16AO95870 558 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 APOC1P02654 83 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 CD2P06729 351 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 CD3EP07766 207 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 UBCP0CG48 685 aaKnown RBP6.81□□□□□ -1.32
VMP1-204ENST00000587259 LAP3P28838 519 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 CSNK1A1P48729 337 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 ZNF84P51523 738 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 ZNF133P52736 654 aaPredicted RBP6.81□□□□□ -1.32
VMP1-204ENST00000587259 SCAND1P57086 179 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 CARD18P57730 90 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 DEFA1P59665 94 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 DEFA3P59666 94 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 LSM6P62312 80 aaKnown RBP6.81□□□□□ -1.32
VMP1-204ENST00000587259 SPOCK1Q08629 439 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 EIF2B1Q14232 305 aaKnown RBP6.81□□□□□ -1.32
VMP1-204ENST00000587259 STK11Q15831 433 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 KCNMB1Q16558 191 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 HIST3H3Q16695 136 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 RGS21Q2M5E4 152 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 CHRFAM7AQ494W8 412 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 ZNF672Q499Z4 452 aaPredicted RBP6.81□□□□□ -1.32
VMP1-204ENST00000587259 ACSM3Q53FZ2 586 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 HSD17B12Q53GQ0 312 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 ZMAT1Q5H9K5 638 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 C10orf128Q5T292 105 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 LIPNQ5VXI9 398 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 HBMQ6B0K9 141 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 ABLIM2Q6H8Q1 611 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 KLHL24Q6TFL4 600 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 TFAP2EQ6VUC0 442 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 DNM1P46Q6ZS02 220 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 BEND4Q6ZU67 534 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 SSX6Q7RTT6 188 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 CEACAM19Q7Z692 300 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 GABRG1Q8N1C3 465 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 SYT14Q8NB59 555 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 OR9K2Q8NGE7 335 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 OR6N1Q8NGY5 312 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 OR2AJ1Q8NGZ0 328 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 GPR148Q8TDV2 347 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 TMEM158Q8WZ71 300 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 DNAJA3Q96EY1 480 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 TRMT61AQ96FX7 289 aaKnown RBP6.81□□□□□ -1.32
VMP1-204ENST00000587259 SLC30A2Q9BRI3 323 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 C1orf198Q9H425 327 aa6.81□□□□□ -1.32
VMP1-204ENST00000587259 MED29Q9NX70 200 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms