RNA–Protein interactions for RNA: ENST00000583160.5

COPS3-217, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 365 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-217ENST00000583160 CALB1P05937 261 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 UGT2B4P06133 528 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 KLK3P07288 261 aaPredicted RBP1.85□□□□□ -2.11
COPS3-217ENST00000583160 CCNB1P14635 433 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 ZNF30P17039 623 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 SDC4P31431 198 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 PCK1P35558 622 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 HPCAL1P37235 193 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 SULT1E1P49888 294 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 UBE2HP62256 183 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 CCL7P80098 99 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 HMGCS1Q01581 520 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 IRF4Q15306 451 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 CEBPEQ15744 281 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 DPYSL2Q16555 572 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 KLHL40Q2TBA0 621 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 DEFB133Q30KQ1 61 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 PYCR3Q53H96 274 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 SPECC1LQ69YQ0 1117 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 PDPK2PQ6A1A2 396 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 LYPD2Q6UXB3 125 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 BRD3OSQ6XYD6 125 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 KIAA1328Q86T90 577 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 DHRSXQ8N5I4 330 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 CATSPER1Q8NEC5 780 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 OR56A4Q8NGH8 313 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 OR52P1PQ8NH57 321 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 OR5W2Q8NH69 310 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 JOSD2Q8TAC2 188 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 LMX1AQ8TE12 382 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 CXorf40AQ8TE69 158 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 PIH1D2Q8WWB5 315 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 RXFP2Q8WXD0 754 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 TBC1D31Q96DN5 1066 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 TM4SF19Q96DZ7 209 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 OR10C1Q96KK4 312 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 TSGA13Q96PP4 275 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 TUBGCP2Q9BSJ2 902 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 FICDQ9BVA6 458 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 CALN1Q9BXU9 219 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 CHRNA10Q9GZZ6 450 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 HSD3B7Q9H2F3 369 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 WDR76Q9H967 626 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 SLC40A1Q9NP59 571 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 NGBQ9NPG2 151 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 SIGLEC8Q9NYZ4 499 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 GNG12Q9UBI6 72 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 SPTAN1Q13813 2472 aaKnown RBP1.85□□□□□ -2.11
COPS3-217ENST00000583160 DOPEY1Q5JWR5 2465 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 SPENQ96T58 3664 aaKnown RBP1.85□□□□□ -2.11
COPS3-217ENST00000583160 LRRK2Q5S007 2527 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 SPTBP11277 2137 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 HECTD1Q9ULT8 2610 aa1.85□□□□□ -2.11
COPS3-217ENST00000583160 CCDC88CQ9P219 2028 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 FLNCQ14315 2725 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 ZGRF1Q86YA3 2104 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 A0A0J9YYE9 177 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 GSAPA4D1B5 854 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 GOLGA6L4A6NEF3 574 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 ZNF705GA8MUZ8 300 aaPredicted RBP1.84□□□□□ -2.11
COPS3-217ENST00000583160 C21orf140B9A014 251 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 CASC3O15234 703 aaKnown RBP1.84□□□□□ -2.11
COPS3-217ENST00000583160 SLC31A2O15432 143 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 TRBC1P01850 177 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 CCDC172P0C7W6 258 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 CCL4P13236 92 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 CTSEP14091 401 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 NPR2P20594 1047 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 STC1P52823 247 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 PLA2G16P53816 162 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 UBE2IP63279 158 aaKnown RBP1.84□□□□□ -2.11
COPS3-217ENST00000583160 OGDHQ02218 1023 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 KLRB1Q12918 225 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 C1orf61Q13536 156 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 IHHQ14623 411 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 PAFAH1B3Q15102 231 aaKnown RBP1.84□□□□□ -2.11
COPS3-217ENST00000583160 KRTAP21-3Q3LHN1 58 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 SAMD4BQ5PRF9 694 aaKnown RBP1.84□□□□□ -2.11
COPS3-217ENST00000583160 HENMT1Q5T8I9 393 aaKnown RBP1.84□□□□□ -2.11
COPS3-217ENST00000583160 FBXW9Q5XUX1 488 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 KCTD16Q68DU8 428 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 FAM71F2Q6NXP2 309 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 CCDC112Q8NEF3 446 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 FAM172AQ8WUF8 416 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 KLK6Q92876 244 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 CMTM7Q96FZ5 175 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 PDXPQ96GD0 296 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 TRIB3Q96RU7 358 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 CRACR2AQ9BSW2 395 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 SPXQ9BT56 116 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 MRPL13Q9BYD1 178 aaKnown RBP1.84□□□□□ -2.11
COPS3-217ENST00000583160 TM6SF2Q9BZW4 377 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 CLSTN2Q9H4D0 955 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 NOX3Q9HBY0 568 aa1.84□□□□□ -2.11
COPS3-217ENST00000583160 RP1L1Q8IWN7 2480 aaPredicted RBP1.84□□□□□ -2.12
COPS3-217ENST00000583160 NCOA6Q14686 2063 aaPredicted RBP1.84□□□□□ -2.12
COPS3-217ENST00000583160 CNTRLQ7Z7A1 2325 aa1.84□□□□□ -2.12
COPS3-217ENST00000583160 SNRNP200O75643 2136 aaKnown RBP1.84□□□□□ -2.12
COPS3-217ENST00000583160 UNC79Q9P2D8 2635 aa1.83□□□□□ -2.12
COPS3-217ENST00000583160 MDC1Q14676 2089 aaKnown RBP1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms