RNA–Protein interactions for RNA: ENST00000581737.1

CSNK1D-220, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 631 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-220ENST00000581737 TMEM53Q6P2H8 277 aa11.73□□□□□ -0.53
CSNK1D-220ENST00000581737 SLC16A14Q7RTX9 510 aa11.73□□□□□ -0.53
CSNK1D-220ENST00000581737 DPY19L4Q7Z388 723 aa11.73□□□□□ -0.53
CSNK1D-220ENST00000581737 ZNF679Q8IYX0 411 aa11.73□□□□□ -0.53
CSNK1D-220ENST00000581737 OR2AJ1Q8NGZ0 328 aa11.73□□□□□ -0.53
CSNK1D-220ENST00000581737 NINJ1Q92982 152 aa11.73□□□□□ -0.53
CSNK1D-220ENST00000581737 OR8B4Q96RC9 309 aa11.73□□□□□ -0.53
CSNK1D-220ENST00000581737 NIPAL2Q9H841 368 aa11.73□□□□□ -0.53
CSNK1D-220ENST00000581737 POLE4Q9NR33 117 aa11.73□□□□□ -0.53
CSNK1D-220ENST00000581737 ACOXLQ9NUZ1 547 aa11.73□□□□□ -0.53
CSNK1D-220ENST00000581737 COPS3Q9UNS2 423 aa11.73□□□□□ -0.53
CSNK1D-220ENST00000581737 ZNF281Q9Y2X9 895 aa11.73□□□□□ -0.53
CSNK1D-220ENST00000581737 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 RGS5O15539 181 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 CST2P09228 141 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 INHBBP09529 407 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 CBR1P16152 277 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 PTAFRP25105 342 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 CDAP32320 146 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 ARR3P36575 388 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 ZNF83P51522 516 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 CCR9P51686 369 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 BMXP51813 675 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 PPP3R1P63098 170 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 ROM1Q03395 351 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 HNRNPA0Q13151 305 aaKnown RBP11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 ALKBH1Q13686 389 aaKnown RBP11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 GSG1Q2KHT4 349 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 FAM27BQ5VT28 67 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 SSX6Q7RTT6 188 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 HIST2H2ABQ8IUE6 130 aaPredicted RBP11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 WFDC11Q8NEX6 87 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 SLC26A10Q8NG04 563 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 OR5AK2Q8NH90 309 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 ABHD4Q8TB40 342 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 GHSRQ92847 366 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 NABP1Q96AH0 204 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 MRI1Q9BV20 369 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 AKIP1Q9NQ31 210 aa11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 COA3Q9Y2R0 106 aaPredicted RBP11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 HEATR1Q9H583 2144 aaKnown RBP11.72□□□□□ -0.53
CSNK1D-220ENST00000581737 TRAV1-2A0A0B4J238 106 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 A0A1W2PR80 420 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 ANKRD61A6NGH8 418 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 KIAA1324LA8MWY0 1029 aaPredicted RBP11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 DEFB108AA8MXU0 73 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 M0R1B8 84 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 DCTN6O00399 190 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 HLA-HP01893 362 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 CD3EP07766 207 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 ZNF12P17014 697 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 CALRP27797 417 aaKnown RBP11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 RPS19P39019 145 aaKnown RBP11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 PPP5CP53041 499 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 LSM6P62312 80 aaKnown RBP11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 PLP2Q04941 152 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 MXD1Q05195 221 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 KCNMB1Q16558 191 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 ACSM3Q53FZ2 586 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 HSD17B12Q53GQ0 312 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 LIPNQ5VXI9 398 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 FDX2Q6P4F2 183 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 SEZ6L2Q6UXD5 910 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 C22orf34Q6ZV56 151 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 RHOUQ7L0Q8 258 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 CEACAM19Q7Z692 300 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 SYT9Q86SS6 491 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 MDP1Q86V88 176 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 PRIMA1Q86XR5 153 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 SKA3Q8IX90 412 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 ZNF676Q8N7Q3 588 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 MINDY2Q8NBR6 621 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 IL17RDQ8NFM7 739 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 PIK3IP1Q96FE7 263 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 PLPPR2Q96GM1 343 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 RADILQ96JH8 1075 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 PGLYRP3Q96LB9 341 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 WDFY2Q96P53 400 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 SH3GL3Q99963 347 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 KCNS3Q9BQ31 491 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 TTTY10Q9BZA0 68 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 C1orf198Q9H425 327 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 MOB1AQ9H8S9 216 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 RNF121Q9H920 327 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 B3GNT2Q9NY97 397 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 CMAHPQ9Y471 501 aa11.71□□□□□ -0.53
CSNK1D-220ENST00000581737 CADP27708 2225 aa11.71□□□□□ -0.54
CSNK1D-220ENST00000581737 FBN1P35555 2871 aaKnown RBP11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 PLCE1Q9P212 2302 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 IGKV3-15P01624 115 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 IGLV1-44P01699 117 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 RAF1P04049 648 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 CD2P06729 351 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 DCTDP32321 178 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 TGFBR1P36897 503 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 ETV6P41212 452 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 PSMD7P51665 324 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 RAB1AP62820 205 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 SCRN3Q0VDG4 424 aa11.7□□□□□ -0.54
CSNK1D-220ENST00000581737 ETFDHQ16134 617 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms