RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 PHF3Q92576 2039 aaKnown RBP11.21□□□□□ -0.62
CDK5RAP3-217ENST00000580287 SMG1Q96Q15 3661 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 TMEM212A6NML5 194 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 EIF1BO60739 113 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 WNT11O96014 354 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 IGHV3-9P01782 118 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 PGA4P0DJD7 388 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 PGA3P0DJD8 388 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ZNF823P16415 610 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CRABP1P29762 137 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CLRN1P58418 232 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 TMEM65Q6PI78 240 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 LRFN4Q6PJG9 635 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ZADH2Q8N4Q0 377 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 SLC25A44Q96H78 314 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 OR8B4Q96RC9 309 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ATRXP46100 2492 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 TRAV8-7A0A075B6U6 113 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 TRGV5A0A0B4J1U4 118 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ZNF726A6NNF4 738 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ZNF708P17019 499 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 PTGS2P35354 604 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 RASGEF1BQ0VAM2 473 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 IKZF1Q13422 519 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ZNF239Q16600 458 aaKnown RBP11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 KCTD18Q6PI47 426 aaPredicted RBP11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ZNF679Q8IYX0 411 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 RPS4Y2Q8TD47 263 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 C4orf45Q96LM5 186 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ABHD6Q9BV23 337 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 SEC61A2Q9H9S3 476 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 RCE1Q9Y256 329 aa11.2□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CACNA1AO00555 2505 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ACOT7O00154 380 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 HPXP02790 462 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 QDPRP09417 244 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ADRA2CP18825 462 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 KIR3DL2P43630 455 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 BLVRAP53004 296 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 COMMD7Q86VX2 200 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 RBMXL3Q8N7X1 1067 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ADPRHL1Q8NDY3 354 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 SYNPRQ8TBG9 265 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 SLC25A38Q96DW6 304 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 GAL3ST1Q99999 423 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 NAA11Q9BSU3 229 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ZCCHC4Q9H5U6 513 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ZDHHC11Q9H8X9 412 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 EMC7Q9NPA0 242 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 PCDHGA9Q9Y5G4 932 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 SPTA1P02549 2419 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 A6NIZ1 184 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ZNF716A6NP11 495 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 K7ENP7 123 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 RRP8O43159 456 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 PNPP00491 289 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 IGHG1P01857 330 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 SSTR2P30874 369 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 GDNFP39905 211 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 RIDAP52758 137 aaKnown RBP11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 RAP1BP61224 184 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 RAP1AP62834 184 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 PLEKHN1Q494U1 663 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 INO80CQ6PI98 192 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 OR52I2Q8NH67 350 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 OR6X1Q8NH79 312 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 HAVCR2Q8TDQ0 301 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ASB17Q8WXJ9 295 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 MCHR2Q969V1 340 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 GHITMQ9H3K2 345 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 RANBP3Q9H6Z4 567 aaPredicted RBP11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ACKR4Q9NPB9 350 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CENPMQ9NSP4 180 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CAMK2AQ9UQM7 478 aa11.19□□□□□ -0.62
CDK5RAP3-217ENST00000580287 A0A1W2PPL8 197 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 RPS10-NUDT3A0A1W2PQS6 291 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 C7orf66A4D0T2 115 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ZNF254O75437 659 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 STOMP27105 288 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 MFGE8Q08431 387 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ZNF169Q14929 603 aaPredicted RBP11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ST3GAL2Q16842 350 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 DNM1P34Q6PK57 102 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 DCXRQ7Z4W1 244 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 OR5M9Q8NGP3 310 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 RBP7Q96R05 134 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 OR2M2Q96R28 347 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 FBXL3Q9UKT7 428 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 LRP12Q9Y561 859 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 FLVCR1Q9Y5Y0 555 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 ARID1AO14497 2285 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 TRBV5-5A0A0J9YX44 114 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 TRIM77I1YAP6 450 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 FAM87AP0C7U9 286 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 MMP15P51511 669 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 CXADRP78310 365 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 SNTB2Q13425 540 aaKnown RBP11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 AANATQ16613 207 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 TBR1Q16650 682 aa11.18□□□□□ -0.62
CDK5RAP3-217ENST00000580287 NOXO1Q8NFA2 376 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms