RNA–Protein interactions for RNA: ENST00000574099.1

CCDC40-211, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-211ENST00000574099 F5H5K5 113 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 GPR37O15354 613 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 LCATP04180 440 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 ACSM4P0C7M7 580 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 HIST1H3AP68431 136 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 ELF3P78545 371 aaPredicted RBP14.39□□□□□ -0.11
CCDC40-211ENST00000574099 MALLQ13021 153 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 TRAM2Q15035 370 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 RSPO1Q2MKA7 263 aaPredicted RBP14.39□□□□□ -0.11
CCDC40-211ENST00000574099 ZBED5Q49AG3 693 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 HIST2H3PS2Q5TEC6 136 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 CFAP77Q6ZQR2 320 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 PTCHD4Q6ZW05 846 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 HIST2H3AQ71DI3 136 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 PGAP1Q75T13 922 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 MRPL21Q7Z2W9 205 aaKnown RBP14.39□□□□□ -0.11
CCDC40-211ENST00000574099 LINC00346Q8IVM7 164 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 OFCC1Q8IZS5 231 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 PNKDQ8N490 385 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 SGCDQ92629 289 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 TSSK2Q96PF2 358 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 NMNAT1Q9HAN9 279 aaPredicted RBP14.39□□□□□ -0.11
CCDC40-211ENST00000574099 TRIM36Q9NQ86 728 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 FBLN5Q9UBX5 448 aa14.39□□□□□ -0.11
CCDC40-211ENST00000574099 RYR3Q15413 4870 aa14.38□□□□□ -0.11
CCDC40-211ENST00000574099 A0A087WUU8 490 aa14.38□□□□□ -0.11
CCDC40-211ENST00000574099 NPFFO15130 113 aa14.38□□□□□ -0.11
CCDC40-211ENST00000574099 NDUFA2O43678 99 aa14.38□□□□□ -0.11
CCDC40-211ENST00000574099 ECDO95905 644 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-211ENST00000574099 PAHP00439 452 aa14.38□□□□□ -0.11
CCDC40-211ENST00000574099 GRPP07492 148 aa14.38□□□□□ -0.11
CCDC40-211ENST00000574099 SDHAP31040 664 aa14.38□□□□□ -0.11
CCDC40-211ENST00000574099 KCNMB1Q16558 191 aa14.38□□□□□ -0.11
CCDC40-211ENST00000574099 ACOT11Q8WXI4 607 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-211ENST00000574099 PPP1R14AQ96A00 147 aa14.38□□□□□ -0.11
CCDC40-211ENST00000574099 PITX2Q99697 317 aa14.38□□□□□ -0.11
CCDC40-211ENST00000574099 VSX1Q9NZR4 365 aaPredicted RBP14.38□□□□□ -0.11
CCDC40-211ENST00000574099 RNASEK-C17orf49H0YIS7 233 aa14.37□□□□□ -0.11
CCDC40-211ENST00000574099 EEF1B2P24534 225 aaKnown RBP14.37□□□□□ -0.11
CCDC40-211ENST00000574099 EFNB2P52799 333 aa14.37□□□□□ -0.11
CCDC40-211ENST00000574099 CYLC2Q14093 348 aaPredicted RBP14.37□□□□□ -0.11
CCDC40-211ENST00000574099 VAX1Q5SQQ9 334 aa14.37□□□□□ -0.11
CCDC40-211ENST00000574099 ERICH5Q6P6B1 374 aa14.37□□□□□ -0.11
CCDC40-211ENST00000574099 MBOAT2Q6ZWT7 520 aa14.37□□□□□ -0.11
CCDC40-211ENST00000574099 VTCN1Q7Z7D3 282 aa14.37□□□□□ -0.11
CCDC40-211ENST00000574099 GCSAMQ8N6F7 178 aa14.37□□□□□ -0.11
CCDC40-211ENST00000574099 KLHDC1Q8N7A1 406 aa14.37□□□□□ -0.11
CCDC40-211ENST00000574099 FAM156AQ8NDB6 213 aa14.37□□□□□ -0.11
CCDC40-211ENST00000574099 LZICQ8WZA0 190 aa14.37□□□□□ -0.11
CCDC40-211ENST00000574099 FAM46AQ96IP4 442 aaKnown RBP14.37□□□□□ -0.11
CCDC40-211ENST00000574099 NDEL1Q9GZM8 345 aa14.37□□□□□ -0.11
CCDC40-211ENST00000574099 TMBIM4Q9HC24 238 aa14.37□□□□□ -0.11
CCDC40-211ENST00000574099 NECAP2Q9NVZ3 263 aa14.37□□□□□ -0.11
CCDC40-211ENST00000574099 RAB21Q9UL25 225 aa14.37□□□□□ -0.11
CCDC40-211ENST00000574099 MEIOCA2RUB1 952 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 CD300LBA8K4G0 201 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 FXYD1O00168 92 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 DCTN6O00399 190 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 FFAR1O14842 300 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 VSIG8P0DPA2 414 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 KDELR2P33947 212 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 SAA4P35542 130 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 GUCA2AQ02747 115 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 TRAP1Q12931 704 aaKnown RBP14.36□□□□□ -0.11
CCDC40-211ENST00000574099 NSUN5P1Q3KNT7 163 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 KRTAP27-1Q3LI81 207 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 LNX2Q8N448 690 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 OR5R1Q8NH85 324 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 OR2AE1Q8NHA4 323 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 PPP1R35Q8TAP8 253 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 NPRL2Q8WTW4 380 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 TSPEARQ8WU66 669 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 CCL13Q99616 98 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 ATF6BQ99941 703 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 SH3GL1Q99961 368 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 AURKCQ9UQB9 309 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 NOP16Q9Y3C1 178 aaKnown RBP14.36□□□□□ -0.11
CCDC40-211ENST00000574099 IER3IP1Q9Y5U9 82 aa14.36□□□□□ -0.11
CCDC40-211ENST00000574099 GGT3PA6NGU5 568 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 H3BUX3 64 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 NDUFB2O95178 105 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 PTBP3O95758 552 aaKnown RBP14.35□□□□□ -0.11
CCDC40-211ENST00000574099 IFNW1P05000 195 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 VSIG10L2P0DP72 767 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 ANOS1P23352 680 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 GGT2P36268 569 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 MDH1P40925 334 aaKnown RBP14.35□□□□□ -0.11
CCDC40-211ENST00000574099 CDKN2AP42771 156 aaKnown RBP14.35□□□□□ -0.11
CCDC40-211ENST00000574099 SELENOWP63302 87 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 LY6EQ16553 131 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 SNAI3Q3KNW1 292 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 GPR139Q6DWJ6 353 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 SLC18B1Q6NT16 456 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 PGM2L1Q6PCE3 622 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 METAP1DQ6UB28 335 aaPredicted RBP14.35□□□□□ -0.11
CCDC40-211ENST00000574099 TMPRSS11FQ6ZWK6 438 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 ADCK1Q86TW2 530 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 RNF113BQ8IZP6 322 aaKnown RBP14.35□□□□□ -0.11
CCDC40-211ENST00000574099 CMTM4Q8IZR5 234 aa14.35□□□□□ -0.11
CCDC40-211ENST00000574099 FAM216BQ8N7L0 139 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms