RNA–Protein interactions for RNA: ENST00000567320.1

CDH1-211, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 352 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-211ENST00000567320 C11orf72Q8NBR9 251 aa0.59□□□□□ -2.31
CDH1-211ENST00000567320 RBPMSQ93062 196 aaKnown RBP0.59□□□□□ -2.31
CDH1-211ENST00000567320 FGF20Q9NP95 211 aaPredicted RBP0.59□□□□□ -2.31
CDH1-211ENST00000567320 SPATA31E1Q6ZUB1 1445 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 PCP4L1A6NKN8 68 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 SYCE1LA8MT33 242 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 CENPBD1B2RD01 187 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 PEX11AO75192 247 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 ANGP03950 147 aaKnown RBP0.58□□□□□ -2.32
CDH1-211ENST00000567320 SERPINA5P05154 406 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 GZMHP20718 246 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 MPIP34949 423 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 POLR2IP36954 125 aaKnown RBP0.58□□□□□ -2.32
CDH1-211ENST00000567320 CCNHP51946 323 aaPredicted RBP0.58□□□□□ -2.32
CDH1-211ENST00000567320 SLC25A24Q6NUK1 477 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 PMF1Q6P1K2 205 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 KDELC1Q6UW63 502 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 MBOAT1Q6ZNC8 495 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 NIPA1Q7RTP0 329 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 TGIF2LXQ8IUE1 241 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 CBR4Q8N4T8 237 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 OR52N1Q8NH53 320 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 OR1L1Q8NH94 360 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 RNASE11Q8TAA1 199 aaKnown RBP0.58□□□□□ -2.32
CDH1-211ENST00000567320 ZNF442Q9H7R0 627 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 INIPQ9NRY2 104 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 SLC22A7Q9Y694 548 aa0.58□□□□□ -2.32
CDH1-211ENST00000567320 A0A1W2PPE3 182 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 CLRN2A0PK11 232 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 H7C1H1 209 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 TAAR5O14804 337 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 KLHL41O60662 606 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 FKBP6O75344 327 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 CDS2O95674 445 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 IGHV1-46P01743 117 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 PRB4P10163 310 aaPredicted RBP0.57□□□□□ -2.32
CDH1-211ENST00000567320 HNRNPH3P31942 346 aaKnown RBP0.57□□□□□ -2.32
CDH1-211ENST00000567320 RAB9AP51151 201 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 TPMTP51580 245 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 CDH6P55285 790 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 CFAP157Q5JU67 520 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 C12orf54Q6X4T0 127 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 EIF4E3Q8N5X7 224 aaKnown RBP0.57□□□□□ -2.32
CDH1-211ENST00000567320 EEF1AKMT3Q96AZ1 226 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 C16orf45Q96MC5 204 aaPredicted RBP0.57□□□□□ -2.32
CDH1-211ENST00000567320 ROPN1BQ9BZX4 212 aaPredicted RBP0.57□□□□□ -2.32
CDH1-211ENST00000567320 VSIRQ9H7M9 311 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 MTCH1Q9NZJ7 389 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 CLEC4AQ9UMR7 237 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 ICE1Q9Y2F5 2266 aa0.57□□□□□ -2.32
CDH1-211ENST00000567320 DENND4AQ7Z401 1863 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 A0A1W2PNM2 257 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 MAGEB3O15480 346 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 PSCAO43653 123 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 B3GALNT1O75752 331 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 MAS1P04201 325 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 NELFEP18615 380 aaKnown RBP0.56□□□□□ -2.32
CDH1-211ENST00000567320 IL32P24001 234 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 NDUFA8P51970 172 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 PDK3Q15120 406 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 LGALSLQ3ZCW2 172 aaPredicted RBP0.56□□□□□ -2.32
CDH1-211ENST00000567320 UBE2UQ5VVX9 321 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 FAM71AQ8IYT1 594 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 ORMDL3Q8N138 153 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 DEFB119Q8N690 84 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 PRELID2Q8N945 189 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 OR52E2Q8NGJ4 325 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 APH1BQ8WW43 257 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 OR5P3Q8WZ94 311 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 CCDC126Q96EE4 140 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 ATP5SQ99766 215 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 ERP44Q9BS26 406 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 OR2S2Q9NQN1 319 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 HPF1Q9NWY4 346 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 IKZF2Q9UKS7 526 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 MRPS7Q9Y2R9 242 aaKnown RBP0.56□□□□□ -2.32
CDH1-211ENST00000567320 AP1M2Q9Y6Q5 423 aa0.56□□□□□ -2.32
CDH1-211ENST00000567320 RP1L1Q8IWN7 2480 aaPredicted RBP0.56□□□□□ -2.32
CDH1-211ENST00000567320 IGKV1-27A0A075B6S5 117 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 XKRY2A2RUG3 117 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 ISPDA4D126 451 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 NCBP2LA6PVI3 153 aaKnown RBP0.55□□□□□ -2.32
CDH1-211ENST00000567320 PDZK1P1A8MUH7 402 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 ANGPT2O15123 496 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 GMFGO60234 142 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 NMT2O60551 498 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 KCNK2O95069 426 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 TSPAN13O95857 204 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 ARG1P05089 322 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 FOXA1P55317 472 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 SS18Q15532 418 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 ATAD3BQ5T9A4 648 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 OPN5Q6U736 354 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 ZNF322Q6U7Q0 402 aaPredicted RBP0.55□□□□□ -2.32
CDH1-211ENST00000567320 Q6ZSR3 168 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 BBS7Q8IWZ6 715 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 LRRC75A-AS1Q8N1F1 130 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 SNX31Q8N9S9 440 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 B3GNT7Q8NFL0 401 aa0.55□□□□□ -2.32
CDH1-211ENST00000567320 ZNF420Q8TAQ5 688 aaPredicted RBP0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms