RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 OR51G1Q8NGK1 321 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 LILRB4Q8NHJ6 448 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 RCN3Q96D15 328 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 SGTBQ96EQ0 304 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 DYNLL2Q96FJ2 89 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 SCGB3A2Q96PL1 93 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 TAAR1Q96RJ0 339 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 HDHD3Q9BSH5 251 aaPredicted RBP1.71□□□□□ -2.14
CHD9-209ENST00000564255 MED4Q9NPJ6 270 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 TREX1Q9NSU2 369 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 MROH7Q68CQ1 1323 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 MTCL1Q9Y4B5 1905 aaKnown RBP1.71□□□□□ -2.14
CHD9-209ENST00000564255 PTPRTO14522 1441 aa1.71□□□□□ -2.14
CHD9-209ENST00000564255 PINLYPA6NC86 204 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 ERI2A8K979 691 aaKnown RBP1.7□□□□□ -2.14
CHD9-209ENST00000564255 PLEKHA8P1O95397 391 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 OR8U9P0C7N5 309 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 THRAP10827 490 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 BGNP21810 368 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 CCNOP22674 350 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 RPS10P46783 165 aaKnown RBP1.7□□□□□ -2.14
CHD9-209ENST00000564255 KCNJ3P48549 501 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 CSNK1A1P48729 337 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 UBE2E1P51965 193 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 KRTAP10-6P60371 365 aaPredicted RBP1.7□□□□□ -2.14
CHD9-209ENST00000564255 RPL18AQ02543 176 aaKnown RBP1.7□□□□□ -2.14
CHD9-209ENST00000564255 CKAP4Q07065 602 aaKnown RBP1.7□□□□□ -2.14
CHD9-209ENST00000564255 TMPRSS11AQ6ZMR5 421 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 SPAG16Q8N0X2 631 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 SNX31Q8N9S9 440 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 OR8U1Q8NH10 309 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 CACNG8Q8WXS5 425 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 RNF170Q96K19 258 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 UBE2E2Q96LR5 201 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 UQCC2Q9BRT2 126 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 REEP1Q9H902 201 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 ZNF302Q9NR11 478 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 FAM49BQ9NUQ9 324 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 RBAKQ9NYW8 714 aaPredicted RBP1.7□□□□□ -2.14
CHD9-209ENST00000564255 GGA2Q9UJY4 613 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 ZNF257Q9Y2Q1 563 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 OR51B2Q9Y5P1 312 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 UBIAD1Q9Y5Z9 338 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 ASTN1O14525 1302 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 IGLV1-50A0A075B6I6 118 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 A0A0A6YYD5 115 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 A0A0J9YXV3 536 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 CYSRT1A8MQ03 144 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 K7ERQ8 282 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 RFXANKO14593 260 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 ENTPD5O75356 428 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 CA11O75493 328 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 HLA-DPB1P04440 258 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 TPM3P06753 285 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 TLX1NBP0CAT3 122 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 HTR2CP28335 458 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 HOXA9P31269 272 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 GPR4P46093 362 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 AVPI1Q5T686 147 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 LCE1EQ5T753 118 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 PID1Q7Z2X4 250 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 PCP2Q8IVA1 136 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 SYS1Q8N2H4 156 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 LRRC29Q8WV35 223 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 ASZ1Q8WWH4 475 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.7□□□□□ -2.14
CHD9-209ENST00000564255 NTAN1Q96AB6 310 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 EXOSC8Q96B26 276 aaKnown RBP1.7□□□□□ -2.14
CHD9-209ENST00000564255 C8orf76Q96K31 380 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 CHRNA10Q9GZZ6 450 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 RAB1BQ9H0U4 201 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 SYT4Q9H2B2 425 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 CSNK1G1Q9HCP0 422 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 ANAPC11Q9NYG5 84 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 SLC17A7Q9P2U7 560 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 RPS6KB2Q9UBS0 482 aa1.7□□□□□ -2.14
CHD9-209ENST00000564255 PTPRMP28827 1452 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 GRIN2BQ13224 1484 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 IGHV5-51A0A0C4DH38 117 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 E7EWF7 191 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 ZMPSTE24O75844 475 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 LCN1P31025 176 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 HCAR3P49019 387 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 UBE2AP49459 152 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 SYNJ2BPP57105 145 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 UBE2NP61088 152 aaKnown RBP1.69□□□□□ -2.14
CHD9-209ENST00000564255 TRDNQ13061 729 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 ATP6V1FQ16864 119 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 C6orf183Q5T699 404 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 AP1ARQ63HQ0 302 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 CEMP1Q6PRD7 247 aaPredicted RBP1.69□□□□□ -2.14
CHD9-209ENST00000564255 PLET1Q6UQ28 207 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 TRIML2Q8N7C3 387 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 LINC00469Q8N7U9 141 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 Q8N976 141 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 DCPSQ96C86 337 aaKnown RBP1.69□□□□□ -2.14
CHD9-209ENST00000564255 SAMD10Q9BYL1 202 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 OR51B5Q9H339 312 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 SLC40A1Q9NP59 571 aa1.69□□□□□ -2.14
CHD9-209ENST00000564255 RGS18Q9NS28 235 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms