RNA–Protein interactions for RNA: ENST00000557477.1

PRPF39-212, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 5

Gene PRPF39, Length 724 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-212ENST00000557477 XPNPEP1Q9NQW7 623 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 SMOXQ9NWM0 555 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 COA4Q9NYJ1 87 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 TAS2R1Q9NYW7 299 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 ONECUT1Q9UBC0 465 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 COPS3Q9UNS2 423 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 SNX24Q9Y343 169 aa3.35□□□□□ -1.87
PRPF39-212ENST00000557477 DOCK8Q8NF50 2099 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 CHD6Q8TD26 2715 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 IGHV1OR15-1A0A075B7D0 117 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 TUBAL3A6NHL2 446 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 ZNF729A6NN14 1252 aaPredicted RBP3.34□□□□□ -1.87
PRPF39-212ENST00000557477 IQCF5A8MTL0 148 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 LOC110117498-PIK3R3F6TDL0 507 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 TNFSF11O14788 317 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 UGT2B17O75795 530 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 SERF1AO75920 110 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 RPP14O95059 124 aaKnown RBP3.34□□□□□ -1.87
PRPF39-212ENST00000557477 PSMG1O95456 288 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 KLF8O95600 359 aaPredicted RBP3.34□□□□□ -1.87
PRPF39-212ENST00000557477 LDOC1O95751 146 aaPredicted RBP3.34□□□□□ -1.87
PRPF39-212ENST00000557477 IGKV3-15P01624 115 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 PRB1P04280 392 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 IFNA4P05014 189 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 APODP05090 189 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 CDK1P06493 297 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 OR4E1P0C645 316 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 ZNF44P15621 663 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 BCKDHBP21953 392 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 CMA1P23946 247 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 CRABP1P29762 137 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 ARL2P36404 184 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 ATP5C1P36542 298 aaKnown RBP3.34□□□□□ -1.87
PRPF39-212ENST00000557477 ACTR1BP42025 376 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 SYKP43405 635 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 AKR1D1P51857 326 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 ACTR3P61158 418 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 PDGFRLQ15198 375 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 XKR4Q5GH76 650 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 EOGTQ5NDL2 527 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 C9orf129Q5T035 196 aaKnown RBP3.34□□□□□ -1.87
PRPF39-212ENST00000557477 MLIPQ5VWP3 458 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 ELP2Q6IA86 826 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 ZFP1Q6P2D0 407 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 XKRXQ6PP77 449 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 ZNF767PQ75MW2 155 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 SSX9Q7RTT3 188 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 EFL1Q7Z2Z2 1120 aaKnown RBP3.34□□□□□ -1.87
PRPF39-212ENST00000557477 DCXRQ7Z4W1 244 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 DPPA2Q7Z7J5 298 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 TRIM69Q86WT6 500 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 CMTM8Q8IZV2 173 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 MTURNQ8N3F0 131 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 MMGT1Q8N4V1 131 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 TRAM1L1Q8N609 369 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 BBS1Q8NFJ9 593 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 OR10H4Q8NGA5 316 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 OR6Q1Q8NGQ2 317 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 DNAJA4Q8WW22 397 aaPredicted RBP3.34□□□□□ -1.87
PRPF39-212ENST00000557477 MRPL48Q96GC5 212 aaKnown RBP3.34□□□□□ -1.87
PRPF39-212ENST00000557477 FOPNLQ96NB1 174 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 SERPINB11Q96P15 392 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 QKIQ96PU8 341 aaKnown RBP eCLIP3.34□□□□□ -1.87
PRPF39-212ENST00000557477 TBX15Q96SF7 602 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 SLC35A5Q9BS91 424 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 CXCL16Q9H2A7 254 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 VCX2Q9H322 139 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 LRRN3Q9H3W5 708 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 GOLPH3Q9H4A6 298 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 Q9H521 79 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 RANBP3Q9H6Z4 567 aaPredicted RBP3.34□□□□□ -1.87
PRPF39-212ENST00000557477 MRPL47Q9HD33 250 aaKnown RBP3.34□□□□□ -1.87
PRPF39-212ENST00000557477 NT5MQ9NPB1 228 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 IL26Q9NPH9 171 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 NANSQ9NR45 359 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 GLTPQ9NZD2 209 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 MAT2BQ9NZL9 334 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 IFNKQ9P0W0 207 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 GLS2Q9UI32 602 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 UBQLN1Q9UMX0 589 aaKnown RBP3.34□□□□□ -1.87
PRPF39-212ENST00000557477 ERVW-1Q9UQF0 538 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 PLLPQ9Y342 182 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 TIMM10BQ9Y5J6 103 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 V9GYQ6 96 aa3.34□□□□□ -1.87
PRPF39-212ENST00000557477 PDCD11Q14690 1871 aaKnown RBP3.34□□□□□ -1.87
PRPF39-212ENST00000557477 RALGAPA1Q6GYQ0 2036 aa3.34□□□□□ -1.88
PRPF39-212ENST00000557477 PKD1L2Q7Z442 2459 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 CEP295Q9C0D2 2601 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 GREB1Q4ZG55 1949 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 GNG14A0A1W2PPG7 69 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 ZFP92A6NM28 416 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 SLC16A4O15374 487 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 SGCEO43556 437 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 HUS1O60921 280 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 LYPLA2O95372 231 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 TNFAIP8O95379 198 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 TGM6O95932 706 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 HSPB1P04792 205 aaKnown RBP3.33□□□□□ -1.88
PRPF39-212ENST00000557477 S100A8P05109 93 aa3.33□□□□□ -1.88
PRPF39-212ENST00000557477 RBP1P09455 135 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms