RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 KLHDC2Q9Y2U9 406 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 GRIP1Q9Y3R0 1128 aa3.93□□□□□ -1.78
SRP54-212ENST00000556992 ABCA7Q8IZY2 2146 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 IGF2RP11717 2491 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 hCG_2014768A0A024R1R8 64 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 TRBV5-7A0A0A0MS05 114 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 TRBV5-5A0A0J9YX44 114 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 LOC101059948A0A1B0GTJ6 334 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 TMEM269A0A1B0GVZ9 245 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 A0A1W2PPK0 400 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 TRABD2BA6NFA1 517 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 ACOD1A6NK06 481 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 IFITM5A6NNB3 132 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 NPIPA2E9PIF3 369 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 F5H697 171 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 NPIPA3F8WFD2 350 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 G3V3Y1 287 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 KLRC4-KLRK1H3BQV0 150 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 PSMD9O00233 223 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 TRAF3IP2O43734 574 aaPredicted RBP3.92□□□□□ -1.78
SRP54-212ENST00000556992 HPGDSO60760 199 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 MPZL1O95297 269 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 APOC1P02654 83 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 ISG15P05161 165 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 HPNP05981 417 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 CD2P06729 351 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 QDPRP09417 244 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 H2BFMP0C1H6 154 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 FTH1P19P0C7X4 201 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 PGA4P0DJD7 388 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 PGA3P0DJD8 388 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 CALCBP10092 127 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 SLC2A2P11168 524 aaPredicted RBP3.92□□□□□ -1.78
SRP54-212ENST00000556992 ELK1P19419 428 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 ITGA3P26006 1051 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 SFTPDP35247 375 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 NR4A2P43354 598 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 PITPNBP48739 271 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 DNASE1L1P49184 302 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 INPP1P49441 399 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 CAPZA1P52907 286 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 CAV3P56539 151 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 CLDN6P56747 220 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 B3GALT5-AS1P59052 145 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 LSM6P62312 80 aaKnown RBP3.92□□□□□ -1.78
SRP54-212ENST00000556992 ASAH1Q13510 395 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 MELKQ14680 651 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 TAF13Q15543 124 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 BCL2A1Q16548 175 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 AGAP7PQ5VUJ5 663 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 TMEM244Q5VVB8 128 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 HACD4Q5VWC8 232 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 SPINK14Q6IE38 97 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 SLC25A25Q6KCM7 469 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 MZT2BQ6NZ67 158 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 CNIH2Q6PI25 160 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 SLC25A47Q6Q0C1 308 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 KLHL24Q6TFL4 600 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 CREB3L2Q70SY1 520 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 GDPD3Q7L5L3 318 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.92□□□□□ -1.78
SRP54-212ENST00000556992 YRDCQ86U90 279 aaKnown RBP3.92□□□□□ -1.78
SRP54-212ENST00000556992 LAX1Q8IWV1 398 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 Q8N402 240 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 RFLNBQ8N5W9 214 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 SAMD12Q8N8I0 201 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 C19orf18Q8NEA5 215 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 DEFB124Q8NES8 71 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 OR9K2Q8NGE7 335 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 OR6N1Q8NGY5 312 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 OR52N5Q8NH56 324 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 ZNF671Q8TAW3 534 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 RNF133Q8WVZ7 376 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 C11orf40Q8WZ69 217 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 TMEM54Q969K7 222 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 MCHR2Q969V1 340 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 PNPLA2Q96AD5 504 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 S100A16Q96FQ6 103 aaKnown RBP3.92□□□□□ -1.78
SRP54-212ENST00000556992 C4orf45Q96LM5 186 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 SFXN2Q96NB2 322 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 AGAP4Q96P64 663 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 DERL3Q96Q80 235 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 TRIB1Q96RU8 372 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 PDCD1LG2Q9BQ51 273 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 EMC6Q9BV81 110 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 OR2B2Q9GZK3 357 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 SRRQ9GZT4 340 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 SLC22A4Q9H015 551 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 C1orf198Q9H425 327 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 NOX4Q9NPH5 578 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 CENPMQ9NSP4 180 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 MED29Q9NX70 200 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 PAQR5Q9NXK6 330 aaPredicted RBP3.92□□□□□ -1.78
SRP54-212ENST00000556992 ANKRD10Q9NXR5 420 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 GLTPQ9NZD2 209 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 CYB5R1Q9UHQ9 305 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 CAMK2AQ9UQM7 478 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 R4GMQ9 66 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 V9GY05 133 aa3.92□□□□□ -1.78
SRP54-212ENST00000556992 V9GYH0 126 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms