RNA–Protein interactions for RNA: ENST00000553990.1

AL390816.1-201, humanhuman

TSL 3 BASIC

Gene AL390816.1, Length 322 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL390816.1-201ENST00000553990 SLC18B1Q6NT16 456 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 SMARCD3Q6STE5 483 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 TMPRSS11FQ6ZWK6 438 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 HIST2H3AQ71DI3 136 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 CBLL1Q75N03 491 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 BTN2A1Q7KYR7 527 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 NLRC3Q7RTR2 1065 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 MRPL21Q7Z2W9 205 aaKnown RBP4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 GCSAMQ8N6F7 178 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 FAM216BQ8N7L0 139 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 CYB561A3Q8NBI2 242 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 PCYOX1LQ8NBM8 494 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 SLC26A10Q8NG04 563 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 OR5T2Q8NGG2 359 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 OR9Q1Q8NGQ5 310 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 OR11L1Q8NGX0 322 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 FNDC8Q8TC99 324 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 TSPEARQ8WU66 669 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 C17orf50Q8WW18 174 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 SPRYD4Q8WW59 207 aaPredicted RBP4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 LZICQ8WZA0 190 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 PLEKHA8Q96JA3 519 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 CCL13Q99616 98 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 PITX2Q99697 317 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 COQ7Q99807 217 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 ATF6BQ99941 703 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 HCAR1Q9BXC0 346 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 NSRP1Q9H0G5 558 aaKnown RBP4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 MMP27Q9H306 513 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 OR52D1Q9H346 318 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 NMNAT1Q9HAN9 279 aaPredicted RBP4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 ELL3Q9HB65 397 aaPredicted RBP4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 TCF7L1Q9HCS4 588 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 NRIP3Q9NQ35 241 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 SNTG1Q9NSN8 517 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 ACOXLQ9NUZ1 547 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 MRPL22Q9NWU5 206 aaKnown RBP4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 TAS2R1Q9NYW7 299 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 ONECUT1Q9UBC0 465 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 FOXJ3Q9UPW0 622 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 AURKCQ9UQB9 309 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 MMP24Q9Y5R2 645 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 ENPP4Q9Y6X5 453 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 DOCK11Q5JSL3 2073 aa4.76□□□□□ -1.65
AL390816.1-201ENST00000553990 ZNF816-ZNF321PA0A0X1KG74 233 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 OOEPA6NGQ2 149 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 GGT3PA6NGU5 568 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 SLC22A31A6NKX4 558 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 CD300LBA8K4G0 201 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 BBIP1A8MTZ0 92 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 M0R135 149 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 LGALS8O00214 317 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 P2RY10O00398 339 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 NDUFA7O95182 113 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 IFNA14P01570 189 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 GYPBP06028 91 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 H1F0P07305 194 aaKnown RBP4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 VIMP08670 466 aaKnown RBP4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 PPIAL4GP0DN37 164 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 TROVE2P10155 538 aaKnown RBP eCLIP4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 CLUP10909 449 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 AMY2BP19961 511 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 IFNA8P32881 189 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 MSX2P35548 267 aaPredicted RBP4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 GGT2P36268 569 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 MDH1P40925 334 aaKnown RBP4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 IER3P46695 156 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 RGS6P49758 472 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 SPIBQ01892 262 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 COX10Q12887 443 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 PPP1R8Q12972 351 aaKnown RBP4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 KCNMB1Q16558 191 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 PCK2Q16822 640 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 ZNF181Q2M3W8 571 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 RFX4Q33E94 735 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 GFOD2Q3B7J2 385 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 KRTAP27-1Q3LI81 207 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 DMRTC1Q5HYR2 192 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 WDR38Q5JTN6 314 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 METTL11BQ5VVY1 283 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 ZNF620Q6ZNG0 422 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 COLCA1Q6ZS62 124 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 C1orf122Q6ZSJ8 110 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 PGAP1Q75T13 922 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 RRM2BQ7LG56 351 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 C1orf87Q8N0U7 546 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 GJC3Q8NFK1 279 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 OR56B2PQ8NGI1 322 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 OR5L1Q8NGL2 311 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 LRRC29Q8WV35 223 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 GATAD2BQ8WXI9 593 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 RORBQ92753 470 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 ZNF799Q96GE5 643 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 SH3GL1Q99961 368 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 IFT27Q9BW83 186 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 HDHD2Q9H0R4 259 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 PPA2Q9H2U2 334 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 PRDM13Q9H4Q3 707 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 EGLN3Q9H6Z9 239 aa4.75□□□□□ -1.65
AL390816.1-201ENST00000553990 DNAJC27Q9NZQ0 273 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms