RNA–Protein interactions for RNA: ENST00000553527.1

TDP1-205, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 910 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-205ENST00000553527 IL18R1Q13478 541 aa20.05■□□□□ 0.8
TDP1-205ENST00000553527 HFEQ30201 348 aa20.05■□□□□ 0.8
TDP1-205ENST00000553527 SPRNQ5BIV9 151 aa20.05■□□□□ 0.8
TDP1-205ENST00000553527 MEDAGQ5VYS4 303 aa20.05■□□□□ 0.8
TDP1-205ENST00000553527 FAM166AQ6J272 317 aa20.05■□□□□ 0.8
TDP1-205ENST00000553527 PRIMA1Q86XR5 153 aa20.05■□□□□ 0.8
TDP1-205ENST00000553527 TIGD4Q8IY51 512 aa20.05■□□□□ 0.8
TDP1-205ENST00000553527 OR2Z1Q8NG97 314 aa20.05■□□□□ 0.8
TDP1-205ENST00000553527 CCL17Q92583 94 aa20.05■□□□□ 0.8
TDP1-205ENST00000553527 APOBEC3DQ96AK3 386 aaPredicted RBP20.05■□□□□ 0.8
TDP1-205ENST00000553527 HAVCR1Q96D42 359 aa20.05■□□□□ 0.8
TDP1-205ENST00000553527 EGLN1Q9GZT9 426 aa20.05■□□□□ 0.8
TDP1-205ENST00000553527 TUBG2Q9NRH3 451 aa20.05■□□□□ 0.8
TDP1-205ENST00000553527 ZDHHC8Q9ULC8 765 aa20.05■□□□□ 0.8
TDP1-205ENST00000553527 ZNF593O00488 134 aaPredicted RBP20.04■□□□□ 0.8
TDP1-205ENST00000553527 ENTPD6O75354 484 aa20.04■□□□□ 0.8
TDP1-205ENST00000553527 LCATP04180 440 aa20.04■□□□□ 0.8
TDP1-205ENST00000553527 PSKH1P11801 424 aa20.04■□□□□ 0.8
TDP1-205ENST00000553527 HTR1FP30939 366 aa20.04■□□□□ 0.8
TDP1-205ENST00000553527 NAA10P41227 235 aaPredicted RBP20.04■□□□□ 0.8
TDP1-205ENST00000553527 HSPA13P48723 471 aa20.04■□□□□ 0.8
TDP1-205ENST00000553527 TNFAIP6P98066 277 aaPredicted RBP20.04■□□□□ 0.8
TDP1-205ENST00000553527 ECH1Q13011 328 aa20.04■□□□□ 0.8
TDP1-205ENST00000553527 SNCBQ16143 134 aa20.04■□□□□ 0.8
TDP1-205ENST00000553527 OCLNQ16625 522 aa20.04■□□□□ 0.8
TDP1-205ENST00000553527 ZMAT1Q5H9K5 638 aa20.04■□□□□ 0.8
TDP1-205ENST00000553527 FAM209AQ5JX71 171 aa20.04■□□□□ 0.8
TDP1-205ENST00000553527 SLC25A30Q5SVS4 291 aa20.04■□□□□ 0.8
TDP1-205ENST00000553527 OR2T2Q6IF00 324 aa20.04■□□□□ 0.8
TDP1-205ENST00000553527 ELMOD3Q96FG2 381 aa20.04■□□□□ 0.8
TDP1-205ENST00000553527 Q96MT0 163 aa20.04■□□□□ 0.8
TDP1-205ENST00000553527 CNN2Q99439 309 aaKnown RBP20.04■□□□□ 0.8
TDP1-205ENST00000553527 PNRC2Q9NPJ4 139 aaKnown RBP20.04■□□□□ 0.8
TDP1-205ENST00000553527 CLN6Q9NWW5 311 aa20.04■□□□□ 0.8
TDP1-205ENST00000553527 CGGBP1Q9UFW8 167 aaPredicted RBP20.04■□□□□ 0.8
TDP1-205ENST00000553527 WARS2Q9UGM6 360 aaKnown RBP20.04■□□□□ 0.8
TDP1-205ENST00000553527 KCNS2Q9ULS6 477 aa20.04■□□□□ 0.8
TDP1-205ENST00000553527 JMJD1CQ15652 2540 aa20.04■□□□□ 0.8
TDP1-205ENST00000553527 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP20.03■□□□□ 0.8
TDP1-205ENST00000553527 SNTNA6NMZ2 147 aa20.03■□□□□ 0.8
TDP1-205ENST00000553527 MRPL3P09001 348 aaKnown RBP20.03■□□□□ 0.8
TDP1-205ENST00000553527 ACSM4P0C7M7 580 aa20.03■□□□□ 0.8
TDP1-205ENST00000553527 GABRB1P18505 474 aa20.03■□□□□ 0.8
TDP1-205ENST00000553527 KITLGP21583 273 aa20.03■□□□□ 0.8
TDP1-205ENST00000553527 PRSS12P56730 875 aa20.03■□□□□ 0.8
TDP1-205ENST00000553527 HNRNPA0Q13151 305 aaKnown RBP20.03■□□□□ 0.8
TDP1-205ENST00000553527 PCK2Q16822 640 aa20.03■□□□□ 0.8
TDP1-205ENST00000553527 KRTAP21-3Q3LHN1 58 aa20.03■□□□□ 0.8
TDP1-205ENST00000553527 CHRFAM7AQ494W8 412 aa20.03■□□□□ 0.8
TDP1-205ENST00000553527 TEX30Q5JUR7 227 aa20.03■□□□□ 0.8
TDP1-205ENST00000553527 DCXRQ7Z4W1 244 aa20.03■□□□□ 0.8
TDP1-205ENST00000553527 C8orf59Q8N0T1 100 aaPredicted RBP20.03■□□□□ 0.8
TDP1-205ENST00000553527 CLDND2Q8NHS1 167 aa20.03■□□□□ 0.8
TDP1-205ENST00000553527 RHOXF1Q8NHV9 184 aa20.03■□□□□ 0.8
TDP1-205ENST00000553527 TFAP2CQ92754 450 aa20.03■□□□□ 0.8
TDP1-205ENST00000553527 CENPMQ9NSP4 180 aa20.03■□□□□ 0.8
TDP1-205ENST00000553527 AASSQ9UDR5 926 aa20.03■□□□□ 0.8
TDP1-205ENST00000553527 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.03■□□□□ 0.8
TDP1-205ENST00000553527 GNAO1P09471 354 aa20.02■□□□□ 0.8
TDP1-205ENST00000553527 RAC2P15153 192 aa20.02■□□□□ 0.8
TDP1-205ENST00000553527 RBMXP38159 391 aaKnown RBP20.02■□□□□ 0.8
TDP1-205ENST00000553527 TPTEP56180 551 aa20.02■□□□□ 0.8
TDP1-205ENST00000553527 CDK5R2Q13319 367 aa20.02■□□□□ 0.8
TDP1-205ENST00000553527 TMED1Q13445 227 aa20.02■□□□□ 0.8
TDP1-205ENST00000553527 TAF13Q15543 124 aa20.02■□□□□ 0.8
TDP1-205ENST00000553527 Q6ZR03 302 aa20.02■□□□□ 0.8
TDP1-205ENST00000553527 SPATC1Q76KD6 591 aa20.02■□□□□ 0.8
TDP1-205ENST00000553527 SHFQ7M4L6 423 aa20.02■□□□□ 0.8
TDP1-205ENST00000553527 SLC16A9Q7RTY1 509 aa20.02■□□□□ 0.8
TDP1-205ENST00000553527 DPY19L4Q7Z388 723 aa20.02■□□□□ 0.8
TDP1-205ENST00000553527 OR10S1Q8NGN2 331 aa20.02■□□□□ 0.8
TDP1-205ENST00000553527 HPS1Q92902 700 aa20.02■□□□□ 0.8
TDP1-205ENST00000553527 DIRC2Q96SL1 478 aa20.02■□□□□ 0.8
TDP1-205ENST00000553527 BEX2Q9BXY8 128 aa20.02■□□□□ 0.8
TDP1-205ENST00000553527 N6AMT1Q9Y5N5 214 aa20.02■□□□□ 0.8
TDP1-205ENST00000553527 TANC2Q9HCD6 1990 aa20.02■□□□□ 0.8
TDP1-205ENST00000553527 CLDN25C9JDP6 229 aa20.01■□□□□ 0.79
TDP1-205ENST00000553527 TNFSF4P23510 183 aa20.01■□□□□ 0.79
TDP1-205ENST00000553527 SLC6A9P48067 706 aa20.01■□□□□ 0.79
TDP1-205ENST00000553527 EIF2B1Q14232 305 aaKnown RBP20.01■□□□□ 0.79
TDP1-205ENST00000553527 IL17RELQ6ZVW7 336 aa20.01■□□□□ 0.79
TDP1-205ENST00000553527 LINC01356Q8N9X3 169 aa20.01■□□□□ 0.79
TDP1-205ENST00000553527 BHLHE23Q8NDY6 225 aa20.01■□□□□ 0.79
TDP1-205ENST00000553527 OR51G2Q8NGK0 314 aa20.01■□□□□ 0.79
TDP1-205ENST00000553527 APH1BQ8WW43 257 aa20.01■□□□□ 0.79
TDP1-205ENST00000553527 SPTSSAQ969W0 71 aa20.01■□□□□ 0.79
TDP1-205ENST00000553527 C1QTNF5Q9BXJ0 243 aa20.01■□□□□ 0.79
TDP1-205ENST00000553527 SHARPINQ9H0F6 387 aa20.01■□□□□ 0.79
TDP1-205ENST00000553527 LPAR2Q9HBW0 351 aa20.01■□□□□ 0.79
TDP1-205ENST00000553527 HAO2Q9NYQ3 351 aa20.01■□□□□ 0.79
TDP1-205ENST00000553527 HSPE1-MOB4S4R3N1 261 aa20.01■□□□□ 0.79
TDP1-205ENST00000553527 J3QW42 95 aa20■□□□□ 0.79
TDP1-205ENST00000553527 M0R135 149 aa20■□□□□ 0.79
TDP1-205ENST00000553527 POU4F2Q12837 409 aa20■□□□□ 0.79
TDP1-205ENST00000553527 KRTAP27-1Q3LI81 207 aa20■□□□□ 0.79
TDP1-205ENST00000553527 FBXW12Q6X9E4 464 aa20■□□□□ 0.79
TDP1-205ENST00000553527 ZNF454Q8N9F8 522 aa20■□□□□ 0.79
TDP1-205ENST00000553527 SLAMF6Q96DU3 332 aa20■□□□□ 0.79
TDP1-205ENST00000553527 ZNF799Q96GE5 643 aa20■□□□□ 0.79
TDP1-205ENST00000553527 COPS4Q9BT78 406 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms