RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 OR1D4P47884 311 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 SLC6A9P48067 706 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 BLKP51451 505 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 MST1LQ2TV78 715 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 ARRDC1Q8N5I2 433 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 USB1Q9BQ65 265 aaKnown RBP15.61■□□□□ 0.09
SYNE3-202ENST00000553340 MTIF3Q9H2K0 278 aaKnown RBP15.61■□□□□ 0.09
SYNE3-202ENST00000553340 PDE7BQ9NP56 450 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 GPR132Q9UNW8 380 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 IGKV3D-11A0A0A0MRZ8 115 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 TRANK1O15050 2925 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 TO15178 435 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 SPP1P10451 314 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 IL11P20809 199 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 ZNF93P35789 620 aaPredicted RBP15.61■□□□□ 0.09
SYNE3-202ENST00000553340 DAP3P51398 398 aaKnown RBP15.61■□□□□ 0.09
SYNE3-202ENST00000553340 MRPS21P82921 87 aaKnown RBP15.61■□□□□ 0.09
SYNE3-202ENST00000553340 PDZK1IP1Q13113 114 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 ACTBL2Q562R1 376 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 PTCRAQ6ISU1 281 aaPredicted RBP15.61■□□□□ 0.09
SYNE3-202ENST00000553340 TTLL10Q6ZVT0 673 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 ROBO4Q8WZ75 1007 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 SAT2Q96F10 170 aaPredicted RBP15.61■□□□□ 0.09
SYNE3-202ENST00000553340 ZC3H10Q96K80 434 aaKnown RBP15.61■□□□□ 0.09
SYNE3-202ENST00000553340 NICN1Q9BSH3 213 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 HRH4Q9H3N8 390 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 C5orf66Q9H5L9 145 aa15.61■□□□□ 0.09
SYNE3-202ENST00000553340 MSGN1A6NI15 193 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 FTCDNL1E5RQL4 147 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 MS4A18H0YCH9 400 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 CRYBA1P05813 215 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 LYL1P12980 280 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 HOXB1P14653 301 aaPredicted RBP15.6■□□□□ 0.09
SYNE3-202ENST00000553340 GABRG2P18507 467 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 ABCD3P28288 659 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 CLDN6P56747 220 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 S100A12P80511 92 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 SLC9A3R2Q15599 337 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 GFOD2Q3B7J2 385 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 MS4A18Q3C1V0 323 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 VAX1Q5SQQ9 334 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.6■□□□□ 0.09
SYNE3-202ENST00000553340 FAM109BQ6ICB4 259 aaPredicted RBP15.6■□□□□ 0.09
SYNE3-202ENST00000553340 RTN4RL2Q86UN3 420 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 OR2I1PQ8NGU4 316 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 SLAMF6Q96DU3 332 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 AQP10Q96PS8 301 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 NRIP2Q9BQI9 281 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 WWTR1Q9GZV5 400 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 PBOV1Q9GZY1 135 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 RHOFQ9HBH0 211 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 OR2S2Q9NQN1 319 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 FLVCR1Q9Y5Y0 555 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 ADAP1O75689 374 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 FARS2O95363 451 aaKnown RBP15.6■□□□□ 0.09
SYNE3-202ENST00000553340 GSTP1P09211 210 aaKnown RBP15.6■□□□□ 0.09
SYNE3-202ENST00000553340 NPY4RP50391 375 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 CLEC18BQ6UXF7 455 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 OR10H5Q8NGA6 315 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 TMEM230Q96A57 120 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 TGM7Q96PF1 710 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 KCNK17Q96T54 332 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 LRRC61Q9BV99 259 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 LPAR5Q9H1C0 372 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 OR5AC2Q9NZP5 309 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 RCC2Q9P258 522 aaKnown RBP15.6■□□□□ 0.09
SYNE3-202ENST00000553340 WIF1Q9Y5W5 379 aa15.6■□□□□ 0.09
SYNE3-202ENST00000553340 IGKV1D-43A0A0B4J1Z2 117 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 IGHV5-51A0A0C4DH38 117 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 LINC01565O15544 149 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 ZNF217O75362 1048 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 APOC1P02654 83 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 RXFP4Q8TDU9 374 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 ADAMTS17Q8TE56 1095 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.59■□□□□ 0.09
SYNE3-202ENST00000553340 SCGB3A2Q96PL1 93 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 MICU1Q9BPX6 476 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 CMSS1Q9BQ75 279 aaKnown RBP15.59■□□□□ 0.09
SYNE3-202ENST00000553340 FOXQ1Q9C009 403 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 ACKR4Q9NPB9 350 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 CUTCQ9NTM9 273 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 COPS7AQ9UBW8 275 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 FAM96BQ9Y3D0 163 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 USP34Q70CQ2 3546 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 CEACAM18A8MTB9 384 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 MBTPS2O43462 519 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 MEOX2P50222 304 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 CAV2P51636 162 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 GFERP55789 205 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 EIF5AP63241 154 aaKnown RBP15.59■□□□□ 0.09
SYNE3-202ENST00000553340 ZP4Q12836 540 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 EIF5AL1Q6IS14 154 aaKnown RBP15.59■□□□□ 0.09
SYNE3-202ENST00000553340 ZNF529Q6P280 563 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 SLC29A4Q7RTT9 530 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 SKA3Q8IX90 412 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 DMBX1Q8NFW5 382 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 LILRB1Q8NHL6 650 aaPredicted RBP15.59■□□□□ 0.09
SYNE3-202ENST00000553340 DAZLQ92904 295 aaKnown RBP15.59■□□□□ 0.09
SYNE3-202ENST00000553340 RAB3CQ96E17 227 aa15.59■□□□□ 0.09
SYNE3-202ENST00000553340 TMEM41AQ96HV5 264 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms