RNA–Protein interactions for RNA: ENST00000552000.2

HOXB3-213, Transcript of homeobox B3, humanhuman

TSL 3

Gene HOXB3, Length 466 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-213ENST00000552000 ERVFRD-1P60508 538 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 TOP3AQ13472 1001 aaPredicted RBP4.37□□□□□ -1.71
HOXB3-213ENST00000552000 ENDOGQ14249 297 aaKnown RBP4.37□□□□□ -1.71
HOXB3-213ENST00000552000 OR8B8Q15620 311 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 CDONQ4KMG0 1287 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 KLHL22Q53GT1 634 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 TMEM177Q53S58 311 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 CLEC12AQ5QGZ9 265 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 C6orf10Q5SRN2 563 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 ARMC4Q5T2S8 1044 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 GCNT6Q5T4J0 391 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 INTS11Q5TA45 600 aaKnown RBP4.37□□□□□ -1.71
HOXB3-213ENST00000552000 PRAMEF6Q5VXH4 476 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 REEP3Q6NUK4 255 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 ZNF613Q6PF04 617 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 TTC33Q6PID6 262 aaPredicted RBP4.37□□□□□ -1.71
HOXB3-213ENST00000552000 RNF144BQ7Z419 303 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 KRT73Q86Y46 540 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 SLC30A8Q8IWU4 369 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 MOSPD2Q8NHP6 518 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 Q8TCH9 128 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 NPRL2Q8WTW4 380 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 C17orf50Q8WW18 174 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 ST8SIA4Q92187 359 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 RORBQ92753 470 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 TRIM63Q969Q1 353 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 PKNOX2Q96KN3 472 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 ZNF582Q96NG8 517 aaPredicted RBP4.37□□□□□ -1.71
HOXB3-213ENST00000552000 NKX3-1Q99801 234 aaPredicted RBP4.37□□□□□ -1.71
HOXB3-213ENST00000552000 SSX3Q99909 188 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 ECSITQ9BQ95 431 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 SPATA5L1Q9BVQ7 753 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 PCDHAC1Q9H158 963 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 MYLK2Q9H1R3 596 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 RAD21L1Q9H4I0 556 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 RANBP3Q9H6Z4 567 aaPredicted RBP4.37□□□□□ -1.71
HOXB3-213ENST00000552000 SMURF2Q9HAU4 748 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 TUBG2Q9NRH3 451 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 INIPQ9NRY2 104 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 C20orf141Q9NUB4 165 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 TMEM100Q9NV29 134 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 H2AFY2Q9P0M6 372 aaPredicted RBP4.37□□□□□ -1.71
HOXB3-213ENST00000552000 STX18Q9P2W9 335 aaKnown RBP4.37□□□□□ -1.71
HOXB3-213ENST00000552000 RNF7Q9UBF6 113 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 RPUSD1Q9UJJ7 312 aaKnown RBP4.37□□□□□ -1.71
HOXB3-213ENST00000552000 MAB21L2Q9Y586 359 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 KPTNQ9Y664 436 aa4.37□□□□□ -1.71
HOXB3-213ENST00000552000 DNAH10Q8IVF4 4471 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 LCE6AA0A183 80 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 SHISA3A0PJX4 238 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 WDR91A4D1P6 747 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 GMNCA6NCL1 334 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 C12orf71A8MTZ7 269 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 CLIC1O00299 241 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 SDHDO14521 159 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 HDAC3O15379 428 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 CHST1O43916 411 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 ECDO95905 644 aaPredicted RBP4.36□□□□□ -1.71
HOXB3-213ENST00000552000 THY1P04216 161 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 SERPINE1P05121 402 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 IL6P05231 212 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 DBHP09172 617 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 COX5BP10606 129 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 NR2C1P13056 603 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 FUT1P19526 365 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 PAX6P26367 422 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 CALRP27797 417 aaKnown RBP4.36□□□□□ -1.71
HOXB3-213ENST00000552000 RPL14P50914 215 aaKnown RBP4.36□□□□□ -1.71
HOXB3-213ENST00000552000 SLC35A2P78381 396 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 CDK6Q00534 326 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 SCRN3Q0VDG4 424 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 FADDQ13158 208 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 MAB21L1Q13394 359 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 HABP2Q14520 560 aaPredicted RBP4.36□□□□□ -1.71
HOXB3-213ENST00000552000 MPPED2Q15777 294 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 NPTX1Q15818 432 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 KCNJ8Q15842 424 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 WHAMMP3Q1A5X7 153 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 CASC10Q5T4H9 136 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 OTPQ5XKR4 325 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 METAP1DQ6UB28 335 aaPredicted RBP4.36□□□□□ -1.71
HOXB3-213ENST00000552000 FBXW12Q6X9E4 464 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 FOXL2NBQ6ZUU3 175 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 RBM45Q8IUH3 476 aaKnown RBP4.36□□□□□ -1.71
HOXB3-213ENST00000552000 ARMC8Q8IUR7 673 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 IFT20Q8IY31 132 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 SMYD1Q8NB12 490 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 PAPD5Q8NDF8 572 aaKnown RBP4.36□□□□□ -1.71
HOXB3-213ENST00000552000 BEND2Q8NDZ0 799 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 OR6T1Q8NGN1 323 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 AENQ8WTP8 325 aaKnown RBP4.36□□□□□ -1.71
HOXB3-213ENST00000552000 UBLCP1Q8WVY7 318 aaPredicted RBP4.36□□□□□ -1.71
HOXB3-213ENST00000552000 ITCHQ96J02 903 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 COG8Q96MW5 612 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 RBP7Q96R05 134 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 OR5M11Q96RB7 305 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 ALG12Q9BV10 488 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 NPFFR1Q9GZQ6 430 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 RMND5AQ9H871 391 aa4.36□□□□□ -1.71
HOXB3-213ENST00000552000 ZNF702PQ9H963 129 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms