RNA–Protein interactions for RNA: ENST00000549963.1

GPN3-206, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 497 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-206ENST00000549963 ACTA1P68133 377 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 CCL8P80075 99 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 MRPS11P82912 194 aaKnown RBP12.76□□□□□ -0.37
GPN3-206ENST00000549963 ROM1Q03395 351 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 CDK5R2Q13319 367 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 TNK1Q13470 666 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 IL18R1Q13478 541 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 SNCBQ16143 134 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 TSTQ16762 297 aaKnown RBP12.76□□□□□ -0.37
GPN3-206ENST00000549963 ZNF829Q3KNS6 432 aaPredicted RBP12.76□□□□□ -0.37
GPN3-206ENST00000549963 OR2T2Q6IF00 324 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 KRTAP1-3Q8IUG1 177 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 ENTHD1Q8IYW4 607 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 OR5AS1Q8N127 324 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 ZNF786Q8N393 782 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 OR8G5Q8NG78 346 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 OR10H4Q8NGA5 316 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 RNFT2Q96EX2 444 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 OR8B4Q96RC9 309 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 PIMREGQ9BSJ6 248 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 SLC22A4Q9H015 551 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 RGCCQ9H4X1 137 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 MSL2Q9HCI7 577 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 TMEM100Q9NV29 134 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 ZNF391Q9UJN7 358 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 KLHDC2Q9Y2U9 406 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 RPL36Q9Y3U8 105 aaKnown RBP12.76□□□□□ -0.37
GPN3-206ENST00000549963 LRP12Q9Y561 859 aa12.76□□□□□ -0.37
GPN3-206ENST00000549963 TMEM269A0A1B0GVZ9 245 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 H0YAE9 185 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 LY6HO94772 140 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 ADH4P08319 380 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 TACSTD2P09758 323 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 TNFRSF1AP19438 455 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 DDOSTP39656 456 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 TNFAIP6P98066 277 aaPredicted RBP12.75□□□□□ -0.37
GPN3-206ENST00000549963 SNAI3Q3KNW1 292 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 KLHL22Q53GT1 634 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 GLYATL3Q5SZD4 288 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 PLEKHG7Q6ZR37 379 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 OR2Z1Q8NG97 314 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 ITFG2Q969R8 447 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 C18orf12Q96KH6 178 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 TBX5Q99593 518 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 TMUB1Q9BVT8 246 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 REPIN1Q9BWE0 567 aaKnown RBP12.75□□□□□ -0.37
GPN3-206ENST00000549963 REG4Q9BYZ8 158 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 SAP30LQ9HAJ7 183 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 DLL4Q9NR61 685 aa12.75□□□□□ -0.37
GPN3-206ENST00000549963 NKX1-2Q9UD57 310 aaPredicted RBP12.75□□□□□ -0.37
GPN3-206ENST00000549963 DAPL1A0PJW8 107 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 PSMD9O00233 223 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 DLGAP1O14490 977 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 FADS2O95864 444 aaKnown RBP12.74□□□□□ -0.37
GPN3-206ENST00000549963 IGHV1-46P01743 117 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 ACHEP22303 614 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 CAPGP40121 348 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 MAGEB1P43366 347 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 TMEM33P57088 247 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 PSMA6P60900 246 aaKnown RBP12.74□□□□□ -0.37
GPN3-206ENST00000549963 ZNF92Q03936 586 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 HFEQ30201 348 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 DNM1P46Q6ZS02 220 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 FAM220AQ7Z4H9 259 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 KCTD20Q7Z5Y7 419 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 FTMTQ8N4E7 242 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 YIPF7Q8N8F6 280 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 BHLHE23Q8NDY6 225 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 OR2AE1Q8NHA4 323 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 C10orf105Q8TEF2 133 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 SGK3Q96BR1 496 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 ELMOD3Q96FG2 381 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 REEP6Q96HR9 211 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 IL19Q9UHD0 177 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 COPS3Q9UNS2 423 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 HSPE1-MOB4S4R3N1 261 aa12.74□□□□□ -0.37
GPN3-206ENST00000549963 MED13LQ71F56 2210 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 IGHV1-69-2A0A0G2JMI3 117 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 A0A1W2PQL4 384 aaPredicted RBP12.73□□□□□ -0.37
GPN3-206ENST00000549963 IRGMA1A4Y4 181 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 TRIM64A6NGJ6 449 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 TRIM64BA6NI03 449 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 METTL15A6NJ78 407 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 ZSCAN5BA6NJL1 495 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 CD300LBA8K4G0 201 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 RNF223E7ERA6 249 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 H0YJX3 145 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 H7C1Q1 480 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 SULT1C4O75897 302 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 APOL3O95236 402 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 HPXP02790 462 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 CD55P08174 381 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 GABRB1P18505 474 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 CRYBB2P43320 205 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 SRP9P49458 86 aaKnown RBP12.73□□□□□ -0.37
GPN3-206ENST00000549963 ADARB1P78563 741 aaKnown RBP12.73□□□□□ -0.37
GPN3-206ENST00000549963 SLC3A1Q07837 685 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 MZT1Q08AG7 82 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 RIPK1Q13546 671 aa12.73□□□□□ -0.37
GPN3-206ENST00000549963 GFOD2Q3B7J2 385 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms