RNA–Protein interactions for RNA: ENST00000548557.1

CASC18-202, Transcript of cancer susceptibility 18, humanhuman

TSL 1 (best) BASIC

Gene CASC18, Length 2,503 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC18-202ENST00000548557 TNFRSF13CQ96RJ3 184 aa5.85□□□□□ -1.47
CASC18-202ENST00000548557 SSX3Q99909 188 aa5.85□□□□□ -1.47
CASC18-202ENST00000548557 C7orf50Q9BRJ6 194 aaKnown RBP5.85□□□□□ -1.47
CASC18-202ENST00000548557 THAP7Q9BT49 309 aaPredicted RBP5.85□□□□□ -1.47
CASC18-202ENST00000548557 GSX2Q9BZM3 304 aa5.85□□□□□ -1.47
CASC18-202ENST00000548557 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.85□□□□□ -1.47
CASC18-202ENST00000548557 ALX4Q9H161 411 aaPredicted RBP5.85□□□□□ -1.47
CASC18-202ENST00000548557 METTL9Q9H1A3 318 aa5.85□□□□□ -1.47
CASC18-202ENST00000548557 NIPAL2Q9H841 368 aa5.85□□□□□ -1.47
CASC18-202ENST00000548557 EIF3KQ9UBQ5 218 aaKnown RBP5.85□□□□□ -1.47
CASC18-202ENST00000548557 ICAM5Q9UMF0 924 aa5.85□□□□□ -1.47
CASC18-202ENST00000548557 URB1O60287 2271 aaKnown RBP5.85□□□□□ -1.47
CASC18-202ENST00000548557 TEX13CA0A0J9YWL9 993 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 A0A1W2PPV4 95 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 MKRN2OSH3BPM6 223 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 SLC25A12O75746 678 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 GYPBP06028 91 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 PGCP20142 388 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 ITPKBP27987 946 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 CRABP1P29762 137 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 SLC6A6P31641 620 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 TALDO1P37837 337 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 RBM34P42696 430 aaKnown RBP5.84□□□□□ -1.47
CASC18-202ENST00000548557 BTG1P62324 171 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 ARG2P78540 354 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 ZNF117Q03924 483 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 TNK1Q13470 666 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 OR1C1Q15619 314 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 EIF2S3LQ2VIR3 472 aaKnown RBP5.84□□□□□ -1.47
CASC18-202ENST00000548557 C3orf36Q3SXR2 165 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 PRAMEF5Q5TYX0 476 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 PRAMEF6Q5VXH4 476 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 CST9LP1Q5W188 147 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 CBLN3Q6UW01 205 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 RPTNQ6XPR3 784 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 SSX6Q7RTT6 188 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 GATSQ8NAP1 163 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 CYB561A3Q8NBI2 242 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 MDS2Q8NDY4 140 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 NUDT10Q8NFP7 164 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 OR5J2Q8NH18 312 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 SMAP2Q8WU79 429 aaPredicted RBP5.84□□□□□ -1.47
CASC18-202ENST00000548557 GSX1Q9H4S2 264 aaPredicted RBP5.84□□□□□ -1.47
CASC18-202ENST00000548557 GALNT9Q9HCQ5 603 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 CHST11Q9NPF2 352 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 KLHL1Q9NR64 748 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 ANKRD10Q9NXR5 420 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 PPP4R1LQ9P1A2 415 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 ST6GALNAC2Q9UJ37 374 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 KLF13Q9Y2Y9 288 aaPredicted RBP5.84□□□□□ -1.47
CASC18-202ENST00000548557 FRYQ5TBA9 3013 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 DMXL2Q8TDJ6 3036 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 NCOR2Q9Y618 2525 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 LIPT2A6NK58 231 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 KLRC4-KLRK1H3BQV0 150 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 ABCD4O14678 606 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 SP1P08047 785 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 SLC2A1P11166 492 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 ADH6P28332 368 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 BTCP35070 178 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 ACVR1BP36896 505 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 TNFSF10P50591 281 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 COL28A1Q2UY09 1125 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 SLC25A35Q3KQZ1 300 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 ACSM3Q53FZ2 586 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 SPINK14Q6IE38 97 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 RGS7BPQ6MZT1 257 aaPredicted RBP5.84□□□□□ -1.47
CASC18-202ENST00000548557 PRSS57Q6UWY2 283 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 LINC00114Q6XXX2 140 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 PGAP1Q75T13 922 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 MS4A15Q8N5U1 240 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 TMEM178AQ8NBL3 297 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 RNASE11Q8TAA1 199 aaKnown RBP5.84□□□□□ -1.47
CASC18-202ENST00000548557 GRPEL2Q8TAA5 225 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 TRMT10AQ8TBZ6 339 aaKnown RBP5.84□□□□□ -1.47
CASC18-202ENST00000548557 GHSRQ92847 366 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 YIPF5Q969M3 257 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 SIGLEC12Q96PQ1 595 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 ASCL2Q99929 193 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 FAM173AQ9BQD7 235 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 ALKBH7Q9BT30 221 aaPredicted RBP5.84□□□□□ -1.47
CASC18-202ENST00000548557 EGLN1Q9GZT9 426 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 ABCG5Q9H222 651 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 PTGES2Q9H7Z7 377 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 PROK2Q9HC23 129 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 MCUBQ9NWR8 336 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 ING3Q9NXR8 418 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 MYEF2Q9P2K5 600 aaKnown RBP5.84□□□□□ -1.47
CASC18-202ENST00000548557 GDF2Q9UK05 429 aaPredicted RBP5.84□□□□□ -1.47
CASC18-202ENST00000548557 SLC5A6Q9Y289 635 aa5.84□□□□□ -1.47
CASC18-202ENST00000548557 DOCK10Q96BY6 2186 aa5.83□□□□□ -1.48
CASC18-202ENST00000548557 TRAV1-2A0A0B4J238 106 aa5.83□□□□□ -1.48
CASC18-202ENST00000548557 TRAV17A0A0B4J275 112 aa5.83□□□□□ -1.48
CASC18-202ENST00000548557 A0A1B0GV90 55 aa5.83□□□□□ -1.48
CASC18-202ENST00000548557 ANKUB1A6NFN9 424 aa5.83□□□□□ -1.48
CASC18-202ENST00000548557 A6NIN4 97 aa5.83□□□□□ -1.48
CASC18-202ENST00000548557 OGG1O15527 345 aa5.83□□□□□ -1.48
CASC18-202ENST00000548557 NME2P1O60361 137 aa5.83□□□□□ -1.48
CASC18-202ENST00000548557 GMDSO60547 372 aa5.83□□□□□ -1.48
CASC18-202ENST00000548557 FZD7O75084 574 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms