RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 C1orf162Q8NEQ5 155 aaPredicted RBP16.94■□□□□ 0.3
SKP2-208ENST00000546211 OPN3Q9H1Y3 402 aaPredicted RBP16.94■□□□□ 0.3
SKP2-208ENST00000546211 NOX3Q9HBY0 568 aa16.94■□□□□ 0.3
SKP2-208ENST00000546211 FREM1Q5H8C1 2179 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 E9PLN8 166 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 IGLV3-1P01715 115 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 SLC2A2P11168 524 aaPredicted RBP16.93■□□□□ 0.3
SKP2-208ENST00000546211 HOXB1P14653 301 aaPredicted RBP16.93■□□□□ 0.3
SKP2-208ENST00000546211 IGFBP3P17936 291 aaPredicted RBP16.93■□□□□ 0.3
SKP2-208ENST00000546211 ADRA2CP18825 462 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 ANOS1P23352 680 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 STOMP27105 288 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 HOXC12P31275 282 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 THBS2P35442 1172 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 GNALP38405 381 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 ZNF45Q02386 682 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 HGFACQ04756 655 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 GABRA6Q16445 453 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 SNAI3Q3KNW1 292 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 CCDC190Q86UF4 302 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 OR1J2Q8NGS2 313 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 GFI1Q99684 422 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 PLEKHA1Q9HB21 404 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 B3GNT2Q9NY97 397 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 ABRACLQ9P1F3 81 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 ADAM30Q9UKF2 790 aa16.93■□□□□ 0.3
SKP2-208ENST00000546211 NCOR2Q9Y618 2525 aa16.92■□□□□ 0.3
SKP2-208ENST00000546211 C5orf63A6NC05 138 aa16.92■□□□□ 0.3
SKP2-208ENST00000546211 IFITM5A6NNB3 132 aa16.92■□□□□ 0.3
SKP2-208ENST00000546211 AIPO00170 330 aa16.92■□□□□ 0.3
SKP2-208ENST00000546211 MTRF1O75570 445 aaKnown RBP16.92■□□□□ 0.3
SKP2-208ENST00000546211 ATF1P18846 271 aa16.92■□□□□ 0.3
SKP2-208ENST00000546211 ETV6P41212 452 aa16.92■□□□□ 0.3
SKP2-208ENST00000546211 P2RY6Q15077 328 aa16.92■□□□□ 0.3
SKP2-208ENST00000546211 MDP1Q86V88 176 aa16.92■□□□□ 0.3
SKP2-208ENST00000546211 PLPP7Q8NBV4 271 aa16.92■□□□□ 0.3
SKP2-208ENST00000546211 BOD1Q96IK1 185 aa16.92■□□□□ 0.3
SKP2-208ENST00000546211 LYZL4Q96KX0 146 aa16.92■□□□□ 0.3
SKP2-208ENST00000546211 SLC30A2Q9BRI3 323 aa16.92■□□□□ 0.3
SKP2-208ENST00000546211 MIXL1Q9H2W2 232 aa16.92■□□□□ 0.3
SKP2-208ENST00000546211 ZNF391Q9UJN7 358 aa16.92■□□□□ 0.3
SKP2-208ENST00000546211 CACNA1AO00555 2505 aa16.91■□□□□ 0.3
SKP2-208ENST00000546211 GTF3C1Q12789 2109 aa16.91■□□□□ 0.3
SKP2-208ENST00000546211 LOC100509620A0A075B734 347 aa16.91■□□□□ 0.3
SKP2-208ENST00000546211 C5orf49A4QMS7 147 aa16.91■□□□□ 0.3
SKP2-208ENST00000546211 MEGF11A6BM72 1044 aa16.91■□□□□ 0.3
SKP2-208ENST00000546211 J3QRK9 145 aa16.91■□□□□ 0.3
SKP2-208ENST00000546211 DHRS3O75911 302 aa16.91■□□□□ 0.3
SKP2-208ENST00000546211 CCNOP22674 350 aa16.91■□□□□ 0.3
SKP2-208ENST00000546211 APLNRP35414 380 aa16.91■□□□□ 0.3
SKP2-208ENST00000546211 HES5Q5TA89 166 aa16.91■□□□□ 0.3
SKP2-208ENST00000546211 ASPHD2Q6ICH7 369 aa16.91■□□□□ 0.3
SKP2-208ENST00000546211 DNAAF1Q8NEP3 725 aa16.91■□□□□ 0.3
SKP2-208ENST00000546211 OR5D14Q8NGL3 314 aa16.91■□□□□ 0.3
SKP2-208ENST00000546211 TRMT10AQ8TBZ6 339 aaKnown RBP16.91■□□□□ 0.3
SKP2-208ENST00000546211 ADAT3Q96EY9 351 aaPredicted RBP16.91■□□□□ 0.3
SKP2-208ENST00000546211 SOX7Q9BT81 388 aa16.91■□□□□ 0.3
SKP2-208ENST00000546211 RGCCQ9H4X1 137 aa16.91■□□□□ 0.3
SKP2-208ENST00000546211 TINAGQ9UJW2 476 aa16.91■□□□□ 0.3
SKP2-208ENST00000546211 HPGDSO60760 199 aa16.9■□□□□ 0.3
SKP2-208ENST00000546211 PMPCAQ10713 525 aa16.9■□□□□ 0.3
SKP2-208ENST00000546211 GLT8D1Q68CQ7 371 aa16.9■□□□□ 0.3
SKP2-208ENST00000546211 CXorf67Q86X51 503 aaPredicted RBP16.9■□□□□ 0.3
SKP2-208ENST00000546211 OR14K1Q8NGZ2 314 aa16.9■□□□□ 0.3
SKP2-208ENST00000546211 ZNF671Q8TAW3 534 aa16.9■□□□□ 0.3
SKP2-208ENST00000546211 SGK3Q96BR1 496 aa16.9■□□□□ 0.3
SKP2-208ENST00000546211 REEP6Q96HR9 211 aa16.9■□□□□ 0.3
SKP2-208ENST00000546211 DIRAS2Q96HU8 199 aa16.9■□□□□ 0.3
SKP2-208ENST00000546211 MRI1Q9BV20 369 aa16.9■□□□□ 0.3
SKP2-208ENST00000546211 C1QTNF5Q9BXJ0 243 aa16.9■□□□□ 0.3
SKP2-208ENST00000546211 V9GYS6 101 aa16.9■□□□□ 0.3
SKP2-208ENST00000546211 XRCC2O43543 280 aa16.89■□□□□ 0.3
SKP2-208ENST00000546211 OPRM1P35372 400 aa16.89■□□□□ 0.3
SKP2-208ENST00000546211 DDOSTP39656 456 aa16.89■□□□□ 0.3
SKP2-208ENST00000546211 PPP5CP53041 499 aa16.89■□□□□ 0.3
SKP2-208ENST00000546211 C16orf87Q6PH81 154 aa16.89■□□□□ 0.3
SKP2-208ENST00000546211 PGAP1Q75T13 922 aa16.89■□□□□ 0.3
SKP2-208ENST00000546211 C17orf78Q8N4C9 275 aa16.89■□□□□ 0.3
SKP2-208ENST00000546211 POM121L2Q96KW2 1035 aa16.89■□□□□ 0.3
SKP2-208ENST00000546211 SH3BGRL2Q9UJC5 107 aa16.89■□□□□ 0.3
SKP2-208ENST00000546211 LOC390937A0A1W2PQ73 354 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 A6NIN4 97 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 FAM25AB3EWG3 89 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 FAM25CB3EWG5 89 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 FAM25GB3EWG6 89 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 PAHP00439 452 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 SERPINA5P05154 406 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 SNRPBP14678 240 aaKnown RBP16.89■□□□□ 0.29
SKP2-208ENST00000546211 RAB3AP20336 220 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 CD40LGP29965 261 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 SPOCK1Q08629 439 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 TSC22D1Q15714 1073 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 GLYATL3Q5SZD4 288 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 Q6ZSR3 168 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 ZNF584Q8IVC4 421 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 NKAIN3Q8N8D7 197 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 SAMD12Q8N8I0 201 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 OR1M1Q8NGA1 313 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 OR2AE1Q8NHA4 323 aa16.89■□□□□ 0.29
SKP2-208ENST00000546211 AKAP1Q92667 903 aaKnown RBP eCLIP16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms