RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 OR52I1Q8NGK6 324 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 OR1J1Q8NGS3 322 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 OR51F2Q8NH61 342 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 RHOXF1Q8NHV9 184 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 KCNJ16Q9NPI9 418 aa6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 HINT3Q9NQE9 182 aaKnown RBP6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.23□□□□□ -1.41
SRGAP1-206ENST00000543397 A0A1B0GTL3 188 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 EREGO14944 169 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 GMDSO60547 372 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 HOXB3P14651 431 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 SHC1P29353 583 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 SNRPGP62308 76 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF468Q5VIY5 522 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 KDM4DQ6B0I6 523 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 TMPRSS7Q7RTY8 843 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 WDSUB1Q8N9V3 476 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 OR2T35Q8NGX2 323 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 OR4C3Q8NH37 302 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 OR4A16Q8NH70 328 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 LGALS14Q8TCE9 139 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 DCUN1D4Q92564 292 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 FAM3DQ96BQ1 224 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 SDSLQ96GA7 329 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 PDCD1LG2Q9BQ51 273 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 RSRP1Q9BUV0 290 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF552Q9H707 407 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 NUBP2Q9Y5Y2 271 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 ANKRD61A6NGH8 418 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 SHISA8B8ZZ34 492 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 SH2D1BO14796 132 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 UBL3O95164 117 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 PDGFBP01127 241 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 HOXB5P09067 269 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 GSG1Q2KHT4 349 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 B3GNTL1Q67FW5 361 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 CLDN22Q8N7P3 220 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 OR51D1Q8NGF3 324 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 ZDHHC16Q969W1 377 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 TMEM43Q9BTV4 400 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 UCK1Q9HA47 277 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 TNFRSF12AQ9NP84 129 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 RCE1Q9Y256 329 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 COL4A1P02462 1669 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 PTTG1O95997 202 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 NRASP01111 189 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 SCG5P05408 212 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 TUBG1P23258 451 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 MTNR1BP49286 362 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 RAB1AP62820 205 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 RAB35Q15286 201 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 RHEBQ15382 184 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 PDLIM3Q53GG5 364 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 SFXN4Q6P4A7 337 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 TRAT1Q6PIZ9 186 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF679Q8IYX0 411 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 M1APQ8TC57 530 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 DYNC2LI1Q8TCX1 351 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 NRG4Q8WWG1 115 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 TSSK2Q96PF2 358 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 GPR84Q9NQS5 396 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 TAS2R16Q9NYV7 291 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 RAB22AQ9UL26 194 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 QSER1Q2KHR3 1735 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 A0A1B0GV50 99 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 SH2D7A6NKC9 451 aaPredicted RBP6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 F5H5P2 479 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 HLA-AP01891 365 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 CHRM2P08172 466 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 SBK3P0C264 359 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 DEFA4P12838 97 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 CNR1P21554 472 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 CAV3P56539 151 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF117Q03924 483 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 GPNMBQ14956 572 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 SPINK14Q6IE38 97 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 STXBP6Q8NFX7 210 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 NUBPLQ8TB37 319 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 RND1Q92730 232 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 SULT4A1Q9BR01 284 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 NOX3Q9HBY0 568 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 ACOXLQ9NUZ1 547 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 GLTPQ9NZD2 209 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 PCOLCE2Q9UKZ9 415 aa6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF638Q14966 1978 aaKnown RBP6.22□□□□□ -1.41
SRGAP1-206ENST00000543397 LILRB5O75023 590 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 NCR1O76036 304 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 HOXA1P49639 335 aaPredicted RBP6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF83P51522 516 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 FZD5Q13467 585 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 APOBEC3DQ96AK3 386 aaPredicted RBP6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 WDR34Q96EX3 536 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 PBDC1Q9BVG4 233 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 IKZF5Q9H5V7 419 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 ESRP2Q9H6T0 727 aaKnown RBP6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 CROCCQ5TZA2 2017 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 MEIKINA0A087WXM9 373 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 A0A1W2PPV4 95 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 C7orf72A4D263 438 aa6.21□□□□□ -1.41
SRGAP1-206ENST00000543397 ZNF701M0R085 212 aaPredicted RBP6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms