RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 RANBP2P49792 3224 aaKnown RBP14.43□□□□□ -0.1
VARS2-212ENST00000542001 GLDNQ6ZMI3 551 aaPredicted RBP14.43□□□□□ -0.1
VARS2-212ENST00000542001 SLC51BQ86UW2 128 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 PXT1Q8NFP0 134 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 PGLYRP3Q96LB9 341 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 STRADBQ9C0K7 418 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 MRPS18AQ9NVS2 196 aaKnown RBP14.43□□□□□ -0.1
VARS2-212ENST00000542001 NTMQ9P121 344 aa14.43□□□□□ -0.1
VARS2-212ENST00000542001 C5orf42Q9H799 3197 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 TGFBR3LH3BV60 316 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 ERVH48-1M5A8F1 160 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 SLC35A1P78382 337 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 PCK2Q16822 640 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 EMC4Q5J8M3 183 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 C9orf40Q8IXQ3 194 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 OR11H4Q8NGC9 324 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 NICN1Q9BSH3 213 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 HINT2Q9BX68 163 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 PCOLCE2Q9UKZ9 415 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 LILRA5A6NI73 299 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 TNFSF11O14788 317 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 SKP2Q13309 424 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 PLA1AQ53H76 456 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 TMPPEQ6ZT21 453 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 CNEP1R1Q8N9A8 125 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 IFI44Q8TCB0 444 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 PADI1Q9ULC6 663 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 R4GN57 208 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 MPDZO75970 2070 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 EFSO43281 561 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 TPOP07202 933 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 CYCSP99999 105 aaKnown RBP14.42□□□□□ -0.1
VARS2-212ENST00000542001 PLEKHN1Q494U1 663 aaPredicted RBP14.42□□□□□ -0.1
VARS2-212ENST00000542001 ADGRG3Q86Y34 549 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 ZNF695Q8IW36 515 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 SLC38A6Q8IZM9 456 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 C9orf62Q8N4C0 152 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 MS4A7Q9GZW8 240 aaPredicted RBP14.42□□□□□ -0.1
VARS2-212ENST00000542001 EVA1AQ9H8M9 152 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 CNTD2Q9H8S5 307 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 PTTG3PQ9NZH4 202 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 MTFP1Q9UDX5 166 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 SHANK1Q9Y566 2161 aa14.42□□□□□ -0.1
VARS2-212ENST00000542001 NDUFB6O95139 128 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 MALLQ13021 153 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 SEZ6L2Q6UXD5 910 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 ST8SIA2Q92186 375 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 CNTNAP3BQ96NU0 1288 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 ZNF649Q9BS31 505 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 PATE3B3GLJ2 98 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 ALG1L2C9J202 215 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 H3BUI4 141 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 M0R135 149 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 XRCC2O43543 280 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 PNPP00491 289 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 APOC1P02654 83 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 ZNF14P17017 642 aaPredicted RBP14.41□□□□□ -0.1
VARS2-212ENST00000542001 AKR1C3P42330 323 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 ASCL1P50553 236 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 FOXK1P85037 733 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 PLA2G7Q13093 441 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 ZNF799Q96GE5 643 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 MEIKINA0A087WXM9 373 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 ZNF354AO60765 605 aaPredicted RBP14.41□□□□□ -0.1
VARS2-212ENST00000542001 PNLIPP16233 465 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 RAB2AP61019 212 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 FUT7Q11130 342 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 RBM39Q14498 530 aaKnown RBP14.41□□□□□ -0.1
VARS2-212ENST00000542001 ZFP82Q8N141 532 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 MTCL1Q9Y4B5 1905 aaKnown RBP14.41□□□□□ -0.1
VARS2-212ENST00000542001 TRIM64BA6NI03 449 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 B8ZZF3 427 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 K7EPK0 472 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 CFDP00746 253 aaPredicted RBP14.41□□□□□ -0.1
VARS2-212ENST00000542001 CELA2AP08217 269 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 CD96P40200 585 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 HLA-BQ31612 363 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 OR5AS1Q8N127 324 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 FAM71E2Q8N5Q1 922 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 GJC3Q8NFK1 279 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 SUCNR1Q9BXA5 334 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 B4GALT7Q9UBV7 327 aa14.41□□□□□ -0.1
VARS2-212ENST00000542001 A0A1W2PP11 408 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 OR5H15A6NDH6 313 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 SGCEO43556 437 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 DDAH2O95865 285 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 ABHD16AO95870 558 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 THBS2P35442 1172 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 DHRS2Q13268 280 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 IKZF1Q13422 519 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 PPP1R1AQ13522 171 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 IL10RAQ13651 578 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 MISPQ8IVT2 679 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 CXorf58Q96LI9 332 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 ZNF75AQ96N20 296 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 ARPC5LQ9BPX5 153 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 ACSM4P0C7M7 580 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 RPS4XP62701 263 aaKnown RBP14.4□□□□□ -0.1
VARS2-212ENST00000542001 AANATQ16613 207 aa14.4□□□□□ -0.1
VARS2-212ENST00000542001 CLEC9AQ6UXN8 241 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms