RNA–Protein interactions for RNA: ENST00000537582.1

SFSWAP-206, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 1,576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-206ENST00000537582 EPXP11678 715 aa13.53□□□□□ -0.24
SFSWAP-206ENST00000537582 AGAP20933 346 aa13.53□□□□□ -0.24
SFSWAP-206ENST00000537582 ERVS71-1P61550 626 aa13.53□□□□□ -0.24
SFSWAP-206ENST00000537582 GLYATL3Q5SZD4 288 aa13.53□□□□□ -0.24
SFSWAP-206ENST00000537582 FAM27D1Q5T7N8 215 aa13.53□□□□□ -0.24
SFSWAP-206ENST00000537582 COLCA1Q6ZS62 124 aa13.53□□□□□ -0.24
SFSWAP-206ENST00000537582 ISOC1Q96CN7 298 aa13.53□□□□□ -0.24
SFSWAP-206ENST00000537582 C1QTNF5Q9BXJ0 243 aa13.53□□□□□ -0.24
SFSWAP-206ENST00000537582 OR10A4Q9H209 315 aa13.53□□□□□ -0.24
SFSWAP-206ENST00000537582 PPIL3Q9H2H8 161 aaKnown RBP13.53□□□□□ -0.24
SFSWAP-206ENST00000537582 CDH20Q9HBT6 801 aa13.53□□□□□ -0.24
SFSWAP-206ENST00000537582 STARD10Q9Y365 291 aa13.53□□□□□ -0.24
SFSWAP-206ENST00000537582 MYO18BQ8IUG5 2567 aa13.52□□□□□ -0.24
SFSWAP-206ENST00000537582 A0A1W2PPK0 400 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 TRIM64BA6NI03 449 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 TMEM212A6NML5 194 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 ZNF35P13682 527 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 CALRP27797 417 aaKnown RBP13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 PCSK6P29122 969 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 SOX2P48431 317 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 NAAAQ02083 359 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 GPR50Q13585 617 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 SPATA46Q5T0L3 261 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 FAM169BQ8N8A8 192 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 ABHD4Q8TB40 342 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 HAVCR2Q8TDQ0 301 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 SGK3Q96BR1 496 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 OR14A2Q96R54 314 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 CENPOQ9BU64 300 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 COMMD4Q9H0A8 199 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 MOB1AQ9H8S9 216 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 GPR84Q9NQS5 396 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 ENPP5Q9UJA9 477 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 ZNF281Q9Y2X9 895 aa13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 USP9XQ93008 2570 aaPredicted RBP13.52□□□□□ -0.25
SFSWAP-206ENST00000537582 DPRXA6NFQ7 191 aa13.51□□□□□ -0.25
SFSWAP-206ENST00000537582 A6NIN4 97 aa13.51□□□□□ -0.25
SFSWAP-206ENST00000537582 ACOD1A6NK06 481 aa13.51□□□□□ -0.25
SFSWAP-206ENST00000537582 GABRPO00591 440 aa13.51□□□□□ -0.25
SFSWAP-206ENST00000537582 SMPD2O60906 423 aa13.51□□□□□ -0.25
SFSWAP-206ENST00000537582 APOC1P02654 83 aa13.51□□□□□ -0.25
SFSWAP-206ENST00000537582 NCS1P62166 190 aa13.51□□□□□ -0.25
SFSWAP-206ENST00000537582 ZNF92Q03936 586 aa13.51□□□□□ -0.25
SFSWAP-206ENST00000537582 HLXQ14774 488 aaPredicted RBP13.51□□□□□ -0.25
SFSWAP-206ENST00000537582 CTF1Q16619 201 aa13.51□□□□□ -0.25
SFSWAP-206ENST00000537582 COMMD2Q86X83 199 aa13.51□□□□□ -0.25
SFSWAP-206ENST00000537582 ANKRD13BQ86YJ7 626 aa13.51□□□□□ -0.25
SFSWAP-206ENST00000537582 FAM71F1Q96KD3 344 aaPredicted RBP13.51□□□□□ -0.25
SFSWAP-206ENST00000537582 EXOSC4Q9NPD3 245 aaKnown RBP13.51□□□□□ -0.25
SFSWAP-206ENST00000537582 PTTG3PQ9NZH4 202 aa13.51□□□□□ -0.25
SFSWAP-206ENST00000537582 STUB1Q9UNE7 303 aa13.51□□□□□ -0.25
SFSWAP-206ENST00000537582 ANKRD61A6NGH8 418 aa13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 AIREO43918 545 aa13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 GPRIN2O60269 458 aa13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 RGS9O75916 674 aaPredicted RBP13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 GABARAPO95166 117 aa13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 IGLV3-1P01715 115 aa13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 CD1AP06126 327 aa13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 PLA2G2AP14555 144 aa13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 CD40P25942 277 aa13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 SORDQ00796 357 aa13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 ACSM3Q53FZ2 586 aa13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 C22orf42Q6IC83 251 aa13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 ZNF544Q6NX49 715 aa13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 CD200R1LQ6Q8B3 271 aa13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 KCNS3Q9BQ31 491 aa13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 USB1Q9BQ65 265 aaKnown RBP13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 OR10A2Q9H208 303 aa13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 HCFC1P51610 2035 aa13.5□□□□□ -0.25
SFSWAP-206ENST00000537582 TRBV5-5A0A0J9YX44 114 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 ATP6V1G2-DDX39BF2Z307 99 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 PIN1P1O15428 100 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 SIAH2O43255 324 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 SC5DO75845 299 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 ISG15P05161 165 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 UBCP0CG48 685 aaKnown RBP13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 PPP3CBP16298 524 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 ACHEP22303 614 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 PSMA1P25786 263 aaKnown RBP13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 VBP1P61758 197 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 BSPH1Q075Z2 132 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 YIF1BQ5BJH7 314 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 ZNF704Q6ZNC4 412 aaPredicted RBP13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 CEACAM19Q7Z692 300 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 OR52H1Q8NGJ2 320 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 OR1J2Q8NGS2 313 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 APOBEC3DQ96AK3 386 aaPredicted RBP13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 C12orf43Q96C57 262 aaKnown RBP13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 LRRC46Q96FV0 321 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 REEP6Q96HR9 211 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 TXNL4BQ9NX01 149 aaKnown RBP13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 A0A0U1RQV5 110 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 SHISA3A0PJX4 238 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 WIPF3A6NGB9 483 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 TUBAL3A6NHL2 446 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 SYT7O43581 403 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 CD53P19397 219 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 UCP2P55851 309 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 TNK1Q13470 666 aa13.49□□□□□ -0.25
SFSWAP-206ENST00000537582 ZMAT1Q5H9K5 638 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms