RNA–Protein interactions for RNA: ENST00000536218.5

LIG1-203, Transcript of DNA ligase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIG1, Length 3,179 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-203ENST00000536218 C17orf105B2RV13 164 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 PPP1R2P9O14990 202 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 ALOX12BO75342 701 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 CALCBP10092 127 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 PSMB6P28072 239 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 NXPH1P58417 271 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 RPP30P78346 268 aaKnown RBP12.51□□□□□ -0.41
LIG1-203ENST00000536218 EIF2B1Q14232 305 aaKnown RBP12.51□□□□□ -0.41
LIG1-203ENST00000536218 GXYLT1Q4G148 440 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 LPCAT3Q6P1A2 487 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 TMEM205Q6UW68 189 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 GPR148Q8TDV2 347 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 DTD1Q8TEA8 209 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 TSLPQ969D9 159 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 DNAJA3Q96EY1 480 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 TNFRSF13CQ96RJ3 184 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 EIF5A2Q9GZV4 153 aaKnown RBP12.51□□□□□ -0.41
LIG1-203ENST00000536218 SYT4Q9H2B2 425 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 PTGES2Q9H7Z7 377 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 BCO1Q9HAY6 547 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 SIRT7Q9NRC8 400 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 CMC2Q9NRP2 79 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 VSX1Q9NZR4 365 aaPredicted RBP12.51□□□□□ -0.41
LIG1-203ENST00000536218 ZNF223Q9UK11 482 aaPredicted RBP12.51□□□□□ -0.41
LIG1-203ENST00000536218 CLDN16Q9Y5I7 305 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 CDC14CA4D256 554 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 SOX1O00570 391 aaPredicted RBP12.51□□□□□ -0.41
LIG1-203ENST00000536218 OR2C1O95371 312 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 CD5P06127 495 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 CT45A8P0DMV1 189 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 CT45A9P0DMV2 189 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 PMELP40967 661 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 DVL1P1P54792 670 aaPredicted RBP12.51□□□□□ -0.41
LIG1-203ENST00000536218 IL13RA1P78552 427 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 CT45A2Q5DJT8 189 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 ZNF627Q7L945 461 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 PRR22Q8IZ63 422 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 C1orf198Q9H425 327 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 WIF1Q9Y5W5 379 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 LILRA5A6NI73 299 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 F8VVB4 439 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 F8VWA3 439 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 PIAS2O75928 621 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 CSTAP01040 98 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 ITGA5P08648 1049 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 AKR1C4P17516 323 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 ADRA2CP18825 462 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 NHLH2Q02577 135 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 TNFRSF9Q07011 255 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 PPP1R1AQ13522 171 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 LBHQ53QV2 105 aaPredicted RBP12.51□□□□□ -0.41
LIG1-203ENST00000536218 KHDC3LQ587J8 217 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 SHISA6Q6ZSJ9 500 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.51□□□□□ -0.41
LIG1-203ENST00000536218 PAQR4Q8N4S7 273 aaPredicted RBP12.51□□□□□ -0.41
LIG1-203ENST00000536218 METTL9Q9H1A3 318 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 CYTL1Q9NRR1 136 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 URGCP-MRPS24S4R325 110 aa12.51□□□□□ -0.41
LIG1-203ENST00000536218 TEX13DA0A0J9YY54 714 aaPredicted RBP12.5□□□□□ -0.41
LIG1-203ENST00000536218 A0A1B0GV50 99 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 TMEM235A6NFC5 223 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 MSGN1A6NI15 193 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 ZFPL1O95159 310 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 LYPD3O95274 346 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 NGFRP08138 427 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 ACAA2P42765 397 aaKnown RBP12.5□□□□□ -0.41
LIG1-203ENST00000536218 GPR3P46089 330 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 GABRA4P48169 554 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 EBPQ15125 230 aaKnown RBP12.5□□□□□ -0.41
LIG1-203ENST00000536218 OR4K13Q8NH42 304 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 GAL3ST4Q96RP7 486 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 CUTCQ9NTM9 273 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 DNAJB12Q9NXW2 375 aaKnown RBP12.5□□□□□ -0.41
LIG1-203ENST00000536218 KCNG2Q9UJ96 466 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 EREGO14944 169 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 ARHGAP40Q5TG30 622 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 KIRREL2Q6UWL6 708 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 Q6ZRG5 221 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 BCORP1Q8N888 145 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 CLEC1AQ8NC01 280 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 CADM4Q8NFZ8 388 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 OR6K6Q8NGW6 343 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 ROBO4Q8WZ75 1007 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 EDAQ92838 391 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 ZNF281Q9Y2X9 895 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 MMACHCQ9Y4U1 282 aa12.5□□□□□ -0.41
LIG1-203ENST00000536218 BCAT2O15382 392 aaPredicted RBP12.49□□□□□ -0.41
LIG1-203ENST00000536218 FCGR3AP08637 254 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 ACTA2P62736 377 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 RAP1AP62834 184 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 ACTG2P63267 376 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 FOXO1Q12778 655 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 CACNA1CQ13936 2221 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 DRAM2Q6UX65 266 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 ZNF227Q86WZ6 799 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 HEATR5AQ86XA9 2040 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 SLC35F2Q8IXU6 374 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 ZSCAN4Q8NAM6 433 aaPredicted RBP12.49□□□□□ -0.41
LIG1-203ENST00000536218 OR52E2Q8NGJ4 325 aa12.49□□□□□ -0.41
LIG1-203ENST00000536218 FAM174AQ8TBP5 190 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms