RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 SMIM11AP58511 58 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 TRAP1Q12931 704 aaKnown RBP9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 MALLQ13021 153 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 SEC23BQ15437 767 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 ZSCAN26Q16670 478 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 TEX30Q5JUR7 227 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 ATPAF1Q5TC12 328 aaPredicted RBP9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 ASPHD2Q6ICH7 369 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 DRAM2Q6UX65 266 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 LYPD2Q6UXB3 125 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 OR5AS1Q8N127 324 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 LINC01006Q8NI28 216 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 TBC1D15Q8TC07 691 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 GATAD2BQ8WXI9 593 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 ITFG2Q969R8 447 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 C12orf43Q96C57 262 aaKnown RBP9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 RCN3Q96D15 328 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 FN3KRPQ9HA64 309 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 EFCAB1Q9HAE3 211 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 RNPEPL1Q9HAU8 725 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 ACOXLQ9NUZ1 547 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 PTTG3PQ9NZH4 202 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 KIF17Q9P2E2 1029 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 ERVK-18Q9QC07 812 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 CTSZQ9UBR2 303 aa9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 SOX21Q9Y651 276 aaPredicted RBP9.28□□□□□ -0.92
CLSTN3-206ENST00000535668 IGHV1-69DA0A0B4J2H0 117 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 TRBV4-1A0A0J9YWV2 114 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 UNC119BA6NIH7 251 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 FCN3O75636 299 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 IGHV1-69P01742 117 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 HLA-DPB1P04440 258 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 MUC1P15941 1255 aaPredicted RBP9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 SLC6A6P31641 620 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 GSSP48637 474 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 TPTEP56180 551 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 MZT1Q08AG7 82 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 MPPED2Q15777 294 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 MIDNQ504T8 468 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 C1orf94Q6P1W5 598 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 FIP1L1Q6UN15 594 aaKnown RBP9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 BRD3OSQ6XYD6 125 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 CFAP77Q6ZQR2 320 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 C17orf107Q6ZR85 190 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 FKBP9P1Q75LS8 142 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 PGAP1Q75T13 922 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 KIR3DL3Q8N743 410 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 C8orf46Q8TAG6 207 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 MAP6Q96JE9 813 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 TSSK2Q96PF2 358 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 DNTTIP1Q9H147 329 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 TLNRD1Q9H1K6 362 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 FGFR1OP2Q9NVK5 253 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 MRPL22Q9NWU5 206 aaKnown RBP9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 SAMD4AQ9UPU9 718 aaKnown RBP9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 ZNF281Q9Y2X9 895 aa9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 FAM32AQ9Y421 112 aaKnown RBP9.27□□□□□ -0.93
CLSTN3-206ENST00000535668 C5orf63A6NC05 138 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 OR6C68A6NDL8 312 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 OOEPA6NGQ2 149 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 M0R135 149 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 EBAG9O00559 213 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 SOCS2O14508 198 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 TOX4O94842 621 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 CRYBA1P05813 215 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 COX4I1P13073 169 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 HIST1H1CP16403 213 aaKnown RBP9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 CDONQ4KMG0 1287 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 FAM76BQ5HYJ3 339 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 FAM201AQ5SY85 155 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 RPL13AP3Q6NVV1 102 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 CORO6Q6QEF8 472 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 GDPGP1Q6ZNW5 385 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 GCSAMQ8N6F7 178 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 LRTOMTQ8WZ04 291 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 SPTSSAQ969W0 71 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 ZDHHC16Q969W1 377 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 ZNF799Q96GE5 643 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 NMNAT3Q96T66 252 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 RBM4BQ9BQ04 359 aaKnown RBP9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 OR52D1Q9H346 318 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 IL20Q9NYY1 176 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 GMPR2Q9P2T1 348 aaKnown RBP9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 TMCC3Q9ULS5 477 aa9.26□□□□□ -0.93
CLSTN3-206ENST00000535668 A0A1B0GVI7 797 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 MDFIC2A0A1B0GVS7 189 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 GPR137BO60478 399 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 CCDC22O60826 627 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 TIPRLO75663 272 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 ZNF205O95201 554 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 GPANK1O95872 356 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 RENP00797 406 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 SFTPBP07988 381 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 CENPAP49450 140 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 KRTAP10-3P60369 221 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 ZNF92Q03936 586 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 TSPAN31Q12999 210 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 TAF9Q16594 264 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 MEP1BQ16820 701 aa9.25□□□□□ -0.93
CLSTN3-206ENST00000535668 SPATS1Q496A3 300 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms