RNA–Protein interactions for RNA: ENST00000533628.5

RPUSD4-208, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene RPUSD4, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-208ENST00000533628 CBX5P45973 191 aa10.98□□□□□ -0.65
RPUSD4-208ENST00000533628 HCCSP53701 268 aa10.98□□□□□ -0.65
RPUSD4-208ENST00000533628 MAD2L1BPQ15013 274 aaPredicted RBP10.98□□□□□ -0.65
RPUSD4-208ENST00000533628 Q5BKY6 102 aa10.98□□□□□ -0.65
RPUSD4-208ENST00000533628 MEDAGQ5VYS4 303 aa10.98□□□□□ -0.65
RPUSD4-208ENST00000533628 SHFQ7M4L6 423 aa10.98□□□□□ -0.65
RPUSD4-208ENST00000533628 NOXA1Q86UR1 476 aa10.98□□□□□ -0.65
RPUSD4-208ENST00000533628 SETD9Q8NE22 299 aa10.98□□□□□ -0.65
RPUSD4-208ENST00000533628 NUP37Q8NFH4 326 aa10.98□□□□□ -0.65
RPUSD4-208ENST00000533628 OR1J2Q8NGS2 313 aa10.98□□□□□ -0.65
RPUSD4-208ENST00000533628 OTOSQ8NHW6 89 aa10.98□□□□□ -0.65
RPUSD4-208ENST00000533628 SLC7A6Q92536 515 aa10.98□□□□□ -0.65
RPUSD4-208ENST00000533628 TMEM80Q96HE8 168 aa10.98□□□□□ -0.65
RPUSD4-208ENST00000533628 HDHD2Q9H0R4 259 aa10.98□□□□□ -0.65
RPUSD4-208ENST00000533628 SNX5Q9Y5X3 404 aa10.98□□□□□ -0.65
RPUSD4-208ENST00000533628 HSPE1-MOB4S4R3N1 261 aa10.98□□□□□ -0.65
RPUSD4-208ENST00000533628 RTTNQ86VV8 2226 aa10.98□□□□□ -0.65
RPUSD4-208ENST00000533628 HS3ST1O14792 307 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 INMTO95050 263 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 SBK2P0C263 348 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 ALOX5APP20292 161 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 APLNRP35414 380 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 HTR5AP47898 357 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 GDI2P50395 445 aaKnown RBP10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 ZNF45Q02386 682 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 TBC1D28Q2M2D7 210 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 TOR2AQ5JU69 321 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 OR4F15Q8NGB8 312 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 FBLIM1Q8WUP2 373 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 YIPF6Q96EC8 236 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 ABHD6Q9BV23 337 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 MMP27Q9H306 513 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 A3GALT2U3KPV4 340 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 C5orf49A4QMS7 147 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 NOS1APO75052 506 aaPredicted RBP10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 ZNF780AO75290 641 aaPredicted RBP10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 MRPL3P09001 348 aaKnown RBP10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 DBHP09172 617 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 OTX1P32242 354 aaPredicted RBP10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 TALDO1P37837 337 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 EIF2B1Q14232 305 aaKnown RBP10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 MSMPQ1L6U9 139 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 SHEQ5VZ18 495 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 LAIR2Q6ISS4 152 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 ZNF767PQ75MW2 155 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 C8orf59Q8N0T1 100 aaPredicted RBP10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 ZNF454Q8N9F8 522 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 DTX3Q8N9I9 347 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 RNF133Q8WVZ7 376 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 IGFBPL1Q8WX77 278 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 SGCDQ92629 289 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 RFKQ969G6 155 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 SLAMF6Q96DU3 332 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 CNN2Q99439 309 aaKnown RBP10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 LIME1Q9H400 295 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 CDH20Q9HBT6 801 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 CISD1Q9NZ45 108 aaKnown RBP10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 COPS3Q9UNS2 423 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 ATP23Q9Y6H3 246 aa10.97□□□□□ -0.65
RPUSD4-208ENST00000533628 PRR32B1ATL7 298 aa10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 J3QRE1 110 aa10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 DBTP11182 482 aaKnown RBP10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 IL5RAQ01344 420 aa10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 ECH1Q13011 328 aa10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 C6orf141Q5SZD1 244 aa10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 UTS2BQ765I0 119 aa10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 ZNF101Q8IZC7 436 aa10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 ZNF611Q8N823 705 aa10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 MCFD2Q8NI22 146 aa10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 LRRC20Q8TCA0 184 aa10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 TMEM171Q8WVE6 324 aa10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 NRGNQ92686 78 aa10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 ATF6BQ99941 703 aa10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 KCNS3Q9BQ31 491 aa10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 SCPEP1Q9HB40 452 aa10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 CLN6Q9NWW5 311 aa10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 EIF3KQ9UBQ5 218 aaKnown RBP10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.96□□□□□ -0.65
RPUSD4-208ENST00000533628 CENPEQ02224 2701 aa10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 LEUTXA8MZ59 168 aa10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 DANCRP0C864 163 aa10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 IL7P13232 177 aa10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 THBS4P35443 961 aa10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 ETV1P50549 477 aa10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 UCP2P55851 309 aa10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 GPR50Q13585 617 aa10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 COLCA1Q6ZS62 124 aa10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 RHOUQ7L0Q8 258 aa10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 RFLNBQ8N5W9 214 aa10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 OR51G2Q8NGK0 314 aa10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 CNIH3Q8TBE1 160 aa10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 SNAPC3Q92966 411 aa10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 C4orf45Q96LM5 186 aa10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 DCLRE1CQ96SD1 692 aaKnown RBP10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 ZNF442Q9H7R0 627 aa10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 CA10Q9NS85 328 aa10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 MRPS18AQ9NVS2 196 aaKnown RBP10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 EXOGQ9Y2C4 368 aaKnown RBP10.96□□□□□ -0.66
RPUSD4-208ENST00000533628 APCP25054 2843 aa10.95□□□□□ -0.66
RPUSD4-208ENST00000533628 HMX3A6NHT5 357 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms