RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 MND1Q9BWT6 205 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 ULBP2Q9BZM5 246 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 LINC00470Q9BZP3 86 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 UNKLQ9H9P5 680 aaKnown RBP9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 SEC61A2Q9H9S3 476 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 B3GAT2Q9NPZ5 323 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 SLC17A5Q9NRA2 495 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 UGT2A1Q9Y4X1 527 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 HEATR1Q9H583 2144 aaKnown RBP9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 NOTCH1P46531 2555 aa9.69□□□□□ -0.86
TRAPPC4-213ENST00000533149 A6NHS1 94 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 VSTM5A8MXK1 200 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZNF670-ZNF695F2Z2N8 137 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 MYL12BO14950 172 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 ITGA5P08648 1049 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZFP36P26651 326 aaKnown RBP9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 PSMB9P28065 219 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 RPS27P42677 84 aaKnown RBP9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 ENTPD1P49961 510 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 GP2P55259 537 aaKnown RBP9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 RAB39AQ14964 217 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 SPHARQ15513 63 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 MED22Q15528 200 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 KCNMB1Q16558 191 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 MEP1BQ16820 701 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 FBLN7Q53RD9 439 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 TEX30Q5JUR7 227 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 SYT6Q5T7P8 510 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 TSPO2Q5TGU0 170 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 KLHL24Q6TFL4 600 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 TMPRSS11AQ6ZMR5 421 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 LINGO2Q7L985 606 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 SSX6Q7RTT6 188 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZNF367Q7RTV3 350 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 DPY19L4Q7Z388 723 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 GPR141Q7Z602 305 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 KLHL36Q8N4N3 616 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 GATAD2BQ8WXI9 593 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZNF837Q96EG3 531 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 COG8Q96MW5 612 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 MNTQ99583 582 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 SLC6A7Q99884 636 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 ALG8Q9BVK2 526 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 SLITRK2Q9H156 845 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 LPAR2Q9HBW0 351 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 GPR35Q9HC97 309 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 ESM1Q9NQ30 184 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 SLC7A10Q9NS82 523 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 COPS3Q9UNS2 423 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 KLHDC2Q9Y2U9 406 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 LSM2Q9Y333 95 aaKnown RBP9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 CAB39Q9Y376 341 aaPredicted RBP9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 TRRAPQ9Y4A5 3859 aa9.68□□□□□ -0.86
TRAPPC4-213ENST00000533149 OR6C65A6NJZ3 312 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 J3QLW9 94 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 MAGEB4O15481 346 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 KRT33AO76009 404 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 SEC14L2O76054 403 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 CRYAAP02489 173 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 SPARCP09486 303 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 PSKH1P11801 424 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZNF19P17023 458 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 ALOX5APP20292 161 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 PAX7P23759 505 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 FPR2P25090 351 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 GUCA1AP43080 201 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZNF84P51523 738 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 IL13RA1P78552 427 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 ROR2Q01974 943 aaKnown RBP9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 DOC2BQ14184 412 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 SGCAQ16586 387 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZNF322Q6U7Q0 402 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 RBMS3Q6XE24 437 aaKnown RBP9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 FOXL2NBQ6ZUU3 175 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 C1QL2Q7Z5L3 287 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 ZNF485Q8NCK3 441 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 OR52N1Q8NH53 320 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 THEM6Q8WUY1 208 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 SNX33Q8WV41 574 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 SPRYD4Q8WW59 207 aaPredicted RBP9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 MRPL48Q96GC5 212 aaKnown RBP9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 MGLLQ99685 303 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 CDADC1Q9BWV3 514 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 ISG20L2Q9H9L3 353 aaKnown RBP9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 CRLF2Q9HC73 371 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 EMC7Q9NPA0 242 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 POLE4Q9NR33 117 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 BABAM2Q9NXR7 383 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 KCNG2Q9UJ96 466 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 LAMP5Q9UJQ1 280 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 TMEM14AQ9Y6G1 99 aa9.67□□□□□ -0.86
TRAPPC4-213ENST00000533149 LOC105371242A0A075B767 164 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 H3BSA7 217 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 HSMCR30P0CW71 290 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 WNT4P56705 351 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 OR12D2P58182 307 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 MRPS34P82930 218 aaKnown RBP9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 EIF2B1Q14232 305 aaKnown RBP9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 PCK2Q16822 640 aa9.66□□□□□ -0.86
TRAPPC4-213ENST00000533149 TIGD6Q17RP2 521 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms