RNA–Protein interactions for RNA: ENST00000519309.5

CTNNA1-215, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-215ENST00000519309 TOP3AQ13472 1001 aaPredicted RBP6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 MPPED2Q15777 294 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 AANATQ16613 207 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 ALG10Q5BKT4 473 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 ERICH5Q6P6B1 374 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 LIAT1Q6ZQX7 453 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 COLCA1Q6ZS62 124 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 BTN2A1Q7KYR7 527 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 PDZD9Q8IXQ8 264 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 FAM86B1Q8N7N1 296 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 DTX3Q8N9I9 347 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 LRRC75AQ8NAA5 344 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 PLPP7Q8NBV4 271 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 BHLHE23Q8NDY6 225 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 BEND2Q8NDZ0 799 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 RP9Q8TA86 221 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 C8orf46Q8TAG6 207 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 RASSF5Q8WWW0 418 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 SLC7A6Q92536 515 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 TNFRSF14Q92956 283 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 R3HDM4Q96D70 268 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 ITPKCQ96DU7 683 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 SGTBQ96EQ0 304 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 ELAC2Q9BQ52 826 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 POLR2J2Q9GZM3 115 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 POLR2J3Q9H1A7 115 aaKnown RBP6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 RAB18Q9NP72 206 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 EMC7Q9NPA0 242 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 MED4Q9NPJ6 270 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 GID8Q9NWU2 228 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 BAG5Q9UL15 447 aa6.86□□□□□ -1.31
CTNNA1-215ENST00000519309 TEX13CA0A0J9YWL9 993 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 WI2-2373I1.2A0A1W2PRP0 233 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 A6NIZ1 184 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 H3BUX3 64 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 CXCR6O00574 342 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 CDC42EP2O14613 210 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 DVL1O14640 695 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 ZNF682O95780 498 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 PAHP00439 452 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 HLA-DPB1P04440 258 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 EEF1B2P24534 225 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 RAP1BP61224 184 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 RAP1AP62834 184 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 SELENOWP63302 87 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 HOXA4Q00056 320 aaPredicted RBP6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 ACSM1Q08AH1 577 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 EGFEM1PQ0D2K5 195 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 NSUN5P1Q3KNT7 163 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 HSP90B2PQ58FF3 399 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 PRAMEF6Q5VXH4 476 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 TEX36Q5VZQ5 186 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 C1orf94Q6P1W5 598 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 TBPL2Q6SJ96 375 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 FAM90A1Q86YD7 464 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 CMTM4Q8IZR5 234 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 Q8N2B8 174 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 RNF148Q8N7C7 305 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 Q8N7P7 452 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 FAM156AQ8NDB6 213 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 OR1F12Q8NHA8 337 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 HSH2DQ96JZ2 352 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 CLPTM1LQ96KA5 538 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 PRRC1Q96M27 445 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 COQ7Q99807 217 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 FAM107BQ9H098 131 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 CNTD2Q9H8S5 307 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 FN3KRPQ9HA64 309 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 SIRT7Q9NRC8 400 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 SERTAD4Q9NUC0 356 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 TMEM100Q9NV29 134 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 ABCD2Q9UBJ2 740 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 NOP16Q9Y3C1 178 aaKnown RBP6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 MED31Q9Y3C7 131 aa6.85□□□□□ -1.31
CTNNA1-215ENST00000519309 TRAV27A0A087WT01 109 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 A0A087WUU8 490 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 HTR3EA5X5Y0 456 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 C3orf84H3BNL1 204 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 H7C1C5 153 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 IMPA2O14732 288 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 AHCYL1O43865 530 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 CHST1O43916 411 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 SERPINA1P01009 418 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 DBHP09172 617 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 VSIG10L2P0DP72 767 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 CD28P10747 220 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 IFI30P13284 250 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 IGLL1P15814 213 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 CD33P20138 364 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 NUDT2P50583 147 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 UBE2E1P51965 193 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 LSM6P62312 80 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 LCN6P62502 163 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 KLRD1Q13241 179 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 DCTN2Q13561 401 aaKnown RBP6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 KRTAP27-1Q3LI81 207 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 ANKDD1AQ495B1 522 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 CCDC92Q53HC0 331 aaPredicted RBP6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 OTPQ5XKR4 325 aa6.84□□□□□ -1.31
CTNNA1-215ENST00000519309 NCR3LG1Q68D85 454 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms