RNA–Protein interactions for RNA: ENST00000518919.1

CTNNA1-212, Transcript of catenin alpha 1, humanhuman

TSL 1 (best)

Gene CTNNA1, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-212ENST00000518919 SLC22A16Q86VW1 577 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 NR2C2APQ86WQ0 139 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 TMPRSS12Q86WS5 348 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 COMMD2Q86X83 199 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 KRTAP1-3Q8IUG1 177 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 ODF3L1Q8IXM7 274 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 SLC35F2Q8IXU6 374 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 C1orf87Q8N0U7 546 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 EID2Q8N6I1 236 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 PRR26Q8N8Z3 221 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 MINDY2Q8NBR6 621 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 APCDD1LQ8NCL9 501 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 NPEPL1Q8NDH3 523 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 OR52E2Q8NGJ4 325 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 OR13C5Q8NGS8 318 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 ST7LQ8TDW4 575 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 FAM216AQ8WUB2 273 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 LIPHQ8WWY8 451 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 HGDQ93099 445 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 C4orf36Q96KX1 117 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 PGLYRP3Q96LB9 341 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 KCTD7Q96MP8 289 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 TSPAN32Q96QS1 320 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 NMNAT3Q96T66 252 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 CNN2Q99439 309 aaKnown RBP4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 TEAD3Q99594 435 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 LPAR4Q99677 370 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 COQ7Q99807 217 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 SLC30A2Q9BRI3 323 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 SF3B5Q9BWJ5 86 aaKnown RBP4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 TTTY10Q9BZA0 68 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 SRRQ9GZT4 340 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 RERGLQ9H628 205 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 SYNDIG1Q9H7V2 258 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 C12orf10Q9HB07 376 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 APMAPQ9HDC9 416 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 ABCB10Q9NRK6 738 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 HIF1ANQ9NWT6 349 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 ZNF224Q9NZL3 707 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 COPS7AQ9UBW8 275 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 ZNF346Q9UL40 294 aaKnown RBP4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 TBC1D24Q9ULP9 559 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 COPS3Q9UNS2 423 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 TRAPPC4Q9Y296 219 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 KLHDC2Q9Y2U9 406 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 PCDHGA1Q9Y5H4 931 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 HEATR5AQ86XA9 2040 aa4.21□□□□□ -1.74
CTNNA1-212ENST00000518919 VCANP13611 3396 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 COL6A3P12111 3177 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 UNC13CQ8NB66 2214 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 TRBV11-1A0A0K0K1C0 115 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 DAPL1A0PJW8 107 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 TMEM72A0PK05 275 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 ISPDA4D126 451 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 IDSB3KWA1 339 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 LOC110117498-PIK3R3F6TDL0 507 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 H7C1C5 153 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 NTN3O00634 580 aaPredicted RBP4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 CTDSPLO15194 276 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 MAGEB4O15481 346 aaPredicted RBP4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 GMFGO60234 142 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 CDC40O60508 579 aaKnown RBP eCLIP4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 EIF4E2O60573 245 aaKnown RBP4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 PFDN1O60925 122 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 NPIPB7O75200 414 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 ALOX12BO75342 701 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 SCRG1O75711 98 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 SC5DO75845 299 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 SNX4O95219 450 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 PLGP00747 810 aaPredicted RBP4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 SLPIP03973 132 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 HLA-DPB1P04440 258 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 CD14P08571 375 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 FAM106CPP0CH98 169 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 HPGDP15428 266 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 CELP19835 753 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 GALP22466 123 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 PYCR1P32322 319 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 S100A5P33763 92 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 PTGER4P35408 488 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 RPL4P36578 427 aaKnown RBP4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 PTGDSP41222 190 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 CDKN2AP42771 156 aaKnown RBP4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 HCCSP53701 268 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 DLX5P56178 289 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 FBXW4P57775 412 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 OR12D2P58182 307 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 SLC26A5P58743 744 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 LCN6P62502 163 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 ACTC1P68032 377 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 ACTA1P68133 377 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 ZNF45Q02386 682 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 RPL18Q07020 188 aaKnown RBP4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 CD300CQ08708 224 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 SIGLEC14Q08ET2 396 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 CDC20Q12834 499 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 KRR1Q13601 381 aaKnown RBP4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 KLF9Q13886 244 aaPredicted RBP4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 CDK5R1Q15078 307 aa4.2□□□□□ -1.74
CTNNA1-212ENST00000518919 QPRTQ15274 297 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms