RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 MROH7Q68CQ1 1323 aa-2.7□□□□□ -2.84
RNU6-539P-201ENST00000516665 FASNP49327 2511 aaKnown RBP-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 RGSL1A5PLK6 1076 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 LRRC30A6NM36 301 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 KLRC4-KLRK1H3BQV0 150 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 SEMA3DO95025 777 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 MT-ND4P03905 459 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 C8orf89P0DMQ9 161 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 PORP16435 677 aaPredicted RBP-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 POLR2IP36954 125 aaKnown RBP-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 NME3Q13232 169 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 PNOCQ13519 176 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 COG2Q14746 738 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 TATDN3Q17R31 274 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 C10orf120Q5SQS8 335 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 LRRC28Q86X40 367 aaPredicted RBP-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 CSGALNACT2Q8N6G5 542 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 COX18Q8N8Q8 333 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 SLC25A29Q8N8R3 303 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 OR10P1Q8NGE3 313 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 SPPL2BQ8TCT7 592 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 ASB17Q8WXJ9 295 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 TMEM54Q969K7 222 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 FAM131CQ96AQ9 280 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 OXGR1Q96P68 337 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 SLC30A2Q9BRI3 323 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 TCHPQ9BT92 498 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 PLEKHF2Q9H8W4 249 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 THUMPD1Q9NXG2 353 aaKnown RBP-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 PISDQ9UG56 409 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 GLS2Q9UI32 602 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 UBN2Q6ZU65 1347 aa-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 DSPP15924 2871 aaKnown RBP-2.71□□□□□ -2.84
RNU6-539P-201ENST00000516665 HTR3EA5X5Y0 456 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 OOEPA6NGQ2 149 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 FXYD1O00168 92 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 RS1O15537 224 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 DUX1O43812 170 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 OR2T1O43869 369 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 IGKV1-5P01602 117 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 RPSAP08865 295 aaKnown RBP-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 HSPD1P10809 573 aaKnown RBP-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 RAB3AP20336 220 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 USF1P22415 310 aaPredicted RBP-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 MARCKSP29966 332 aaPredicted RBP-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 CAPZA1P52907 286 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 ZNF121P58317 390 aaPredicted RBP-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 TNFRSF17Q02223 184 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 ZMYND11Q15326 602 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 TMEM155Q4W5P6 130 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 HECTD3Q5T447 861 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 CDR2LQ86X02 465 aaPredicted RBP-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 FNDC5Q8NAU1 212 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 OR6K6Q8NGW6 343 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 NAP1L4Q99733 375 aaKnown RBP-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 TUBGCP2Q9BSJ2 902 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 GHITMQ9H3K2 345 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 MAGEF1Q9HAY2 307 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 RDH14Q9HBH5 336 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 MRPL47Q9HD33 250 aaKnown RBP-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 PIPOXQ9P0Z9 390 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 PEF1Q9UBV8 284 aaKnown RBP-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 VPREB3Q9UKI3 123 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 FBXL3Q9UKT7 428 aa-2.72□□□□□ -2.84
RNU6-539P-201ENST00000516665 FAT2Q9NYQ8 4349 aa-2.72□□□□□ -2.85
RNU6-539P-201ENST00000516665 CADP27708 2225 aa-2.72□□□□□ -2.85
RNU6-539P-201ENST00000516665 LOC285556D6RIA3 1793 aa-2.72□□□□□ -2.85
RNU6-539P-201ENST00000516665 CCDC7Q96M83 1385 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 LOC110117498A0A087WWA1 95 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 LOC102724200A0A096LPH7 203 aaPredicted RBP-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 B3GAT3O94766 335 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 NDUFA7O95182 113 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 CD36P16671 472 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 DRD5P21918 477 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 YAP1P46937 504 aaKnown RBP-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 P2RX1P51575 399 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 TRMT12Q53H54 448 aaKnown RBP-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 KRBOX4Q5JUW0 171 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 PEX26Q7Z412 305 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 LYG2Q86SG7 212 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 RBM45Q8IUH3 476 aaKnown RBP-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 OR8B12Q8NGG6 310 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 SCLT1Q96NL6 688 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 SLC6A7Q99884 636 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 C16orf95Q9H693 158 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 CWH43Q9H720 699 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 ADAP2Q9NPF8 381 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 STX18Q9P2W9 335 aaKnown RBP-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 COPS7AQ9UBW8 275 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 NAGKQ9UJ70 344 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 RAB22AQ9UL26 194 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 LHFPL6Q9Y693 200 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 FRMPD4Q14CM0 1322 aa-2.73□□□□□ -2.85
RNU6-539P-201ENST00000516665 PTPRBP23467 1997 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 CCDC182A6NF36 153 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 CENPBD1B2RD01 187 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 NME2P1O60361 137 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 EIF4E2O60573 245 aaKnown RBP-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 AGR2O95994 175 aa-2.74□□□□□ -2.85
RNU6-539P-201ENST00000516665 OR5H8P0DN80 308 aa-2.74□□□□□ -2.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms