RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 C1orf198Q9H425 327 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 LYRM4Q9HD34 91 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 ZC4H2Q9NQZ6 224 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 PXMP2Q9NR77 195 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 SLC17A7Q9P2U7 560 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 TNS2Q63HR2 1409 aa1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 KIF26AQ9ULI4 1882 aaPredicted RBP1.96□□□□□ -2.1
TRAPPC11-207ENST00000511409 ZNF850A8MQ14 1090 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 PDZK1P1A8MUH7 402 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 H0YJW9 148 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 BCKDKO14874 412 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 NMT2O60551 498 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 EIF1BO60739 113 aaKnown RBP1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 CCNE2O96020 404 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 MYL9P24844 172 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 EIF1P41567 113 aaKnown RBP1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 MAGEA1P43355 309 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 RPS5P46782 204 aaKnown RBP1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 SERPINB8P50452 374 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 RAD51Q06609 339 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 SHHQ15465 462 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 GCSAMLQ5JQS6 135 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 BHLHA15Q7RTS1 189 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 HMGN2P46Q86SG4 172 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 TTLQ8NG68 377 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 OR1J4Q8NGS1 313 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 OR13G1Q8NGZ3 307 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 OR51F2Q8NH61 342 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 OR10G6Q8NH81 332 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 CIRBP-AS1Q8TBR5 109 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 AGR3Q8TD06 166 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 RAB1CQ92928 201 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 RPEQ96AT9 228 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 APH1AQ96BI3 265 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 CDX2Q99626 313 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 RBBP8Q99708 897 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 TIMM29Q9BSF4 260 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 ZNF2Q9BSG1 426 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 GGTLC1Q9BX51 225 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 CLSTN2Q9H4D0 955 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 MRPS30Q9NP92 439 aaKnown RBP1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 MCUBQ9NWR8 336 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 AHSPQ9NZD4 102 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 RABL2AQ9UBK7 228 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 COL4A4P53420 1690 aaPredicted RBP1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 DOCK8Q8NF50 2099 aa1.95□□□□□ -2.1
TRAPPC11-207ENST00000511409 MROH7Q68CQ1 1323 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 WDR19Q8NEZ3 1342 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 PCDH11XQ9BZA7 1347 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 TUBGCP6Q96RT7 1819 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 PTPRTO14522 1441 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 FHOD3Q2V2M9 1422 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 TRAV6A0A075B6T7 132 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 TRAV25A0A0B4J276 109 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 A0A1W2PRD5 423 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 TMEM120BA0PK00 339 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 NCF1BA6NI72 391 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 NCF1CA8MVU1 366 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 KRBOX1C9JBD0 128 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 SOCS1O15524 211 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 CHMP2AO43633 222 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 SLC19A2O60779 497 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 GLAP06280 429 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 PGA5P0DJD9 388 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 ME2P23368 584 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 NBL1P41271 181 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 NDUFA8P51970 172 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 GFERP55789 205 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 IRF8Q02556 426 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 ZNF33AQ06730 810 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 GABRA6Q16445 453 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 PRSS8Q16651 343 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 ZNF829Q3KNS6 432 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 UNC93AQ86WB7 457 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 UBAC2Q8NBM4 344 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 RMI2Q96E14 147 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 BTN2A3PQ96KV6 586 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 SULT4A1Q9BR01 284 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 TMEM243Q9BU79 118 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 ING2Q9H160 280 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 C8orf17Q9NRJ1 99 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 RGS18Q9NS28 235 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 DDX19BQ9UMR2 479 aa1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 YARS2Q9Y2Z4 477 aaKnown RBP1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 CAB39Q9Y376 341 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 COL22A1Q8NFW1 1626 aaPredicted RBP1.94□□□□□ -2.1
TRAPPC11-207ENST00000511409 IGLV3-12A0A075B6K2 115 aa1.93□□□□□ -2.1
TRAPPC11-207ENST00000511409 CENPVL3A0A0U1RRI6 287 aa1.93□□□□□ -2.1
TRAPPC11-207ENST00000511409 OR5H1A6NKK0 313 aa1.93□□□□□ -2.1
TRAPPC11-207ENST00000511409 ANKRD65E5RJM6 399 aa1.93□□□□□ -2.1
TRAPPC11-207ENST00000511409 XRCC2O43543 280 aa1.93□□□□□ -2.1
TRAPPC11-207ENST00000511409 CTAG2O75638 210 aa1.93□□□□□ -2.1
TRAPPC11-207ENST00000511409 GLSO94925 669 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC11-207ENST00000511409 TDP2O95551 362 aa1.93□□□□□ -2.1
TRAPPC11-207ENST00000511409 PAHP00439 452 aa1.93□□□□□ -2.1
TRAPPC11-207ENST00000511409 ASGR1P07306 291 aa1.93□□□□□ -2.1
TRAPPC11-207ENST00000511409 PGA4P0DJD7 388 aa1.93□□□□□ -2.1
TRAPPC11-207ENST00000511409 PGA3P0DJD8 388 aa1.93□□□□□ -2.1
TRAPPC11-207ENST00000511409 ZNF14P17017 642 aaPredicted RBP1.93□□□□□ -2.1
TRAPPC11-207ENST00000511409 RAB5AP20339 215 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms