RNA–Protein interactions for RNA: ENST00000504541.1

COL4A5-207, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 5

Gene COL4A5, Length 859 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-207ENST00000504541 ETV1P50549 477 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 CCR9P51686 369 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 GBX2P52951 348 aaPredicted RBP5.3□□□□□ -1.56
COL4A5-207ENST00000504541 MLLT10P55197 1068 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 SH3BGRP55822 239 aaPredicted RBP5.3□□□□□ -1.56
COL4A5-207ENST00000504541 PCBD1P61457 104 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 VAMP2P63027 116 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 HIST1H3AP68431 136 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 SRYQ05066 204 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 RBPJQ06330 500 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 FOXF2Q12947 444 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 CAMK2DQ13557 499 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 GUSBP1Q15486 140 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 NADK2Q4G0N4 442 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 ARMCX4Q5H9R4 360 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 CEP78Q5JTW2 689 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 HIST2H3PS2Q5TEC6 136 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 ZNF544Q6NX49 715 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 RPL22L1Q6P5R6 122 aaKnown RBP5.3□□□□□ -1.56
COL4A5-207ENST00000504541 CD200R1LQ6Q8B3 271 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 LINC00299Q6ZSB3 139 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 HIST2H3AQ71DI3 136 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 SSX8Q7RTT4 187 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 SLC35F2Q8IXU6 374 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 ZNF679Q8IYX0 411 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 GJC3Q8NFK1 279 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 OR4F15Q8NGB8 312 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 OSR1Q8TAX0 266 aaPredicted RBP5.3□□□□□ -1.56
COL4A5-207ENST00000504541 FNDC9Q8TBE3 224 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 FAM57AQ8TBR7 257 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 RAB2BQ8WUD1 216 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 ZNRF4Q8WWF5 429 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 ROBO4Q8WZ75 1007 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 AKAP1Q92667 903 aaKnown RBP eCLIP5.3□□□□□ -1.56
COL4A5-207ENST00000504541 HTRA1Q92743 480 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 THRSPQ92748 146 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 YIPF6Q96EC8 236 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 ZNF845Q96IR2 970 aaPredicted RBP5.3□□□□□ -1.56
COL4A5-207ENST00000504541 TSSK2Q96PF2 358 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 CHCHD6Q9BRQ6 235 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 TTYH2Q9BSA4 534 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 EMC6Q9BV81 110 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 MROQ9BYG7 248 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 RBM38Q9H0Z9 239 aaKnown RBP5.3□□□□□ -1.56
COL4A5-207ENST00000504541 MED20Q9H944 212 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 MOV10Q9HCE1 1003 aaKnown RBP5.3□□□□□ -1.56
COL4A5-207ENST00000504541 CYB5R1Q9UHQ9 305 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 LAMP5Q9UJQ1 280 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 UBE2J1Q9Y385 318 aaPredicted RBP5.3□□□□□ -1.56
COL4A5-207ENST00000504541 CEPT1Q9Y6K0 416 aa5.3□□□□□ -1.56
COL4A5-207ENST00000504541 CACNA1AO00555 2505 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 CFAP54Q96N23 3096 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 A0A087X0M5 115 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 A0A1B0GX30 115 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 MED19A0JLT2 244 aaPredicted RBP5.29□□□□□ -1.56
COL4A5-207ENST00000504541 F5H0A9 414 aaPredicted RBP5.29□□□□□ -1.56
COL4A5-207ENST00000504541 H3BSA7 217 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 GPRIN2O60269 458 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 SERPINI2O75830 405 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 FARS2O95363 451 aaKnown RBP5.29□□□□□ -1.56
COL4A5-207ENST00000504541 SERPINA3P01011 423 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 PTHP01270 115 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 HLA-DPB1P04440 258 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 KRT8P05787 483 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 GYPBP06028 91 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 CST2P09228 141 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 MSR1P21757 451 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 TCEA1P23193 301 aaKnown RBP5.29□□□□□ -1.56
COL4A5-207ENST00000504541 FGF9P31371 208 aaPredicted RBP5.29□□□□□ -1.56
COL4A5-207ENST00000504541 CEACAM8P31997 349 aaPredicted RBP5.29□□□□□ -1.56
COL4A5-207ENST00000504541 PYCR1P32322 319 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 THBS4P35443 961 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 UGT2B10P36537 528 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 MAP2K4P45985 399 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 TDGF1P3P51864 188 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 TUBA1BP68363 451 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 SIRPAP78324 504 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 TGFBR3Q03167 851 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 ZNF85Q03923 595 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 ECH1Q13011 328 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 MELKQ14680 651 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 P2RY6Q15077 328 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 MED22Q15528 200 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 ACSF3Q4G176 576 aaPredicted RBP5.29□□□□□ -1.56
COL4A5-207ENST00000504541 FBXW9Q5XUX1 488 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 TMEM211Q6ICI0 200 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 PAMR1Q6UXH9 720 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 ZNF813Q6ZN06 617 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 TUBA1AQ71U36 451 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 P4HA3Q7Z4N8 544 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 LHFPL3Q86UP9 236 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 SATL1Q86VE3 508 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 TUSC5Q8IXB3 177 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 PHC2Q8IXK0 858 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 GPR137CQ8N3F9 429 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 SYT14Q8NB59 555 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 CCDC54Q8NEL0 328 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 OR10H4Q8NGA5 316 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 OR6K6Q8NGW6 343 aa5.29□□□□□ -1.56
COL4A5-207ENST00000504541 OR6K3Q8NGY3 331 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms