RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 LILRA6Q6PI73 481 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 BAGE3Q86Y29 109 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 BAGE2Q86Y30 109 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 NOXO1Q8NFA2 376 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 DLL4Q9NR61 685 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 ZNF629Q9UEG4 869 aaPredicted RBP14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 NSG2Q9Y328 171 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 CNIH1O95406 144 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 OPRM1P35372 400 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 GPR12P47775 334 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 GABRA4P48169 554 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 MMP15P51511 669 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 DSCR4P56555 118 aaPredicted RBP14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 ZNF121P58317 390 aaPredicted RBP14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 KIAA0040Q15053 153 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 BAK1Q16611 211 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 TOR2AQ5JU69 321 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 OR2AK2Q8NG84 335 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 MITD1Q8WV92 249 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 CORO2AQ92828 525 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 MED30Q96HR3 178 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 PPP1R3CQ9UQK1 317 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 MEIKINA0A087WXM9 373 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 A0A0B4J2E0 115 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 A0A1B0GX12 115 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 RAB27BO00194 218 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 HRO43593 1189 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 WDR1O75083 606 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 FAAP20Q6NZ36 180 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 OR2V1Q8NHB1 315 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 CMTM3Q96MX0 182 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 NUDT9Q9BW91 350 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 FLVCR2Q9UPI3 526 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 KCNE1BA0A087WTH5 132 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 ZNF724A8MTY0 619 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 LYG2Q86SG7 212 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 CDH26Q8IXH8 852 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 WDR34Q96EX3 536 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 ING1Q9UK53 422 aaPredicted RBP14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 RNF150Q9ULK6 438 aa14.93□□□□□ -0.02
PCDHA1-203ENST00000504120 HEXAP06865 529 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 RPL12P30050 165 aaKnown RBP14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 METAP1P53582 386 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 WNT3P56703 355 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 SNRPNP63162 240 aaKnown RBP14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 DHODHQ02127 395 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 CTF1Q16619 201 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 PNLIPRP3Q17RR3 467 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 TMEM268Q5VZI3 342 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 DTWD2Q8NBA8 298 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 OTOSQ8NHW6 89 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 APH1BQ8WW43 257 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 TECTBQ96PL2 329 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 AUNIPQ9H7T9 357 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 IGHV3-15A0A0B4J1V0 119 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 BHLHE40O14503 412 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 ICMTO60725 284 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 DBPQ10586 325 aaPredicted RBP14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 SLC23A1Q9UHI7 598 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 SLC17A2O00624 439 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 PPP1R2P9O14990 202 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 PPM1DO15297 605 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 ADH4P08319 380 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 NME1P15531 152 aaKnown RBP14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 MGMTP16455 207 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 SLC25A1P53007 311 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 CDC20BQ86Y33 519 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 ZNF683Q8IZ20 524 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 OR8B4Q96RC9 309 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 OPA3Q9H6K4 179 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 SSTP61278 116 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 DEFA6Q01524 100 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 C1orf87Q8N0U7 546 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 C2orf50Q96LR7 162 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 WNK3Q9BYP7 1800 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 NKX6-2Q9C056 277 aaPredicted RBP14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 MED9Q9NWA0 146 aa14.92□□□□□ -0.02
PCDHA1-203ENST00000504120 ZNF816-ZNF321PA0A0X1KG74 233 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 OR10J4P0C629 311 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 THBS4P35443 961 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 NDUFA6P56556 154 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 CDK5Q00535 292 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 DUSP2Q05923 314 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 SLC25A35Q3KQZ1 300 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 MARCH1Q8TCQ1 289 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 TMED6Q8WW62 240 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 SIGLEC7Q9Y286 467 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 FIGNL2A6NMB9 653 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 GLI4P10075 376 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 DCTDP32321 178 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 FAM185AQ8N0U4 392 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 OR4Q3Q8NH05 313 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 PP6455Q8WZ26 134 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 MRGPRX3Q96LB0 322 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 LINC01387J3KSC0 135 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 TERTO14746 1132 aaKnown RBP14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 TNFSF15O95150 251 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 B4GALT1P15291 398 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 DTYMKP23919 212 aa14.91□□□□□ -0.02
PCDHA1-203ENST00000504120 AGFG1P52594 562 aaKnown RBP14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms