RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 SLC17A7Q9P2U7 560 aa0.99□□□□□ -2.25
SMAD1-203ENST00000502342 FARSAQ9Y285 508 aaKnown RBP0.99□□□□□ -2.25
SMAD1-203ENST00000502342 YARS2Q9Y2Z4 477 aaKnown RBP0.99□□□□□ -2.25
SMAD1-203ENST00000502342 FHOD3Q2V2M9 1422 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 ADGRA3Q8IWK6 1321 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 BAZ2AQ9UIF9 1905 aaKnown RBP0.98□□□□□ -2.25
SMAD1-203ENST00000502342 SMCO3A2RU48 225 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 PDZK1P1A8MUH7 402 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 C4orf51C9J302 202 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 TAAR5O14804 337 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 RAD51CO43502 376 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 OR7C2O60412 319 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 CLDN11O75508 207 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 FLOT1O75955 427 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 MT-ND4P03905 459 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 SERPINE2P07093 398 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 CD28P10747 220 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 EIF2S2P20042 333 aaKnown RBP0.98□□□□□ -2.25
SMAD1-203ENST00000502342 PRKACBP22694 351 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 HLA-DMAP28067 261 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 TAS2R43P59537 309 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 TNFRSF9Q07011 255 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 BTN1A1Q13410 526 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 ILKQ13418 452 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 TRAM2Q15035 370 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 TPTE2P1Q5T6R2 138 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 REEP3Q6NUK4 255 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 TBPL2Q6SJ96 375 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 NANOGNBQ7Z5D8 188 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 UBAC2Q8NBM4 344 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 OR2Z1Q8NG97 314 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 OR56B2PQ8NGI1 322 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 NUBPLQ8TB37 319 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 RERGQ96A58 199 aaPredicted RBP0.98□□□□□ -2.25
SMAD1-203ENST00000502342 RNF145Q96MT1 663 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 CRACR2AQ9BSW2 395 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 SAMD10Q9BYL1 202 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 ANKRD60Q9BZ19 345 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 RACGAP1Q9H0H5 632 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 ASF1BQ9NVP2 202 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 TAS2R1Q9NYW7 299 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 PISDQ9UG56 409 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 MCTS1Q9ULC4 181 aaKnown RBP0.98□□□□□ -2.25
SMAD1-203ENST00000502342 PLXNB1O43157 2135 aa0.98□□□□□ -2.25
SMAD1-203ENST00000502342 CACNA1DQ01668 2161 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 NCBP2LA6PVI3 153 aaKnown RBP0.97□□□□□ -2.25
SMAD1-203ENST00000502342 H7C0C1 242 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 J3QKU1 62 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 SIRPB1O00241 398 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 LSM1O15116 133 aaKnown RBP0.97□□□□□ -2.25
SMAD1-203ENST00000502342 OR2J3O76001 311 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 IGLV2-8P01709 118 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 CT45A6P0DMU7 189 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 CT45A5P0DMU8 189 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 CT45A7P0DMV0 189 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 TROVE2P10155 538 aaKnown RBP eCLIP0.97□□□□□ -2.25
SMAD1-203ENST00000502342 CD99P14209 185 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 HTR1DP28221 377 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 RRM2P31350 389 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 ATP5OP48047 213 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 RAB7AP51149 207 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 CHRNA6Q15825 494 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 HSP90AB3PQ58FF7 597 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 CT45A1Q5HYN5 189 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 TMEM69Q5SWH9 247 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 ZFAND6Q6FIF0 208 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 CD300LGQ6UXG3 332 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 RTL4Q6ZR62 310 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 SLC16A14Q7RTX9 510 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 DAZ4Q86SG3 579 aaKnown RBP0.97□□□□□ -2.25
SMAD1-203ENST00000502342 NT5DC3Q86UY8 548 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 IQCKQ8N0W5 287 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 LINC00469Q8N7U9 141 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 CT45A3Q8NHU0 189 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 RXFP4Q8TDU9 374 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 CAPSLQ8WWF8 208 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 FBXO32Q969P5 355 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 NT5C3BQ969T7 300 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 NRBF2Q96F24 287 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 C18orf15Q96N68 181 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 KLF6Q99612 283 aaPredicted RBP0.97□□□□□ -2.25
SMAD1-203ENST00000502342 PKIBQ9C010 78 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 DUSP21Q9H596 190 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 LINC00574Q9H8X3 128 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 RETNQ9HD89 108 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 DAZ1Q9NQZ3 744 aaKnown RBP0.97□□□□□ -2.25
SMAD1-203ENST00000502342 SLC39A1Q9NY26 324 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 TAS2R5Q9NYW4 299 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 LRRC42Q9Y546 428 aa0.97□□□□□ -2.25
SMAD1-203ENST00000502342 PCDH11XQ9BZA7 1347 aa0.96□□□□□ -2.26
SMAD1-203ENST00000502342 MUC6Q6W4X9 2439 aa0.96□□□□□ -2.26
SMAD1-203ENST00000502342 E7EQL1 145 aa0.96□□□□□ -2.26
SMAD1-203ENST00000502342 NMT2O60551 498 aa0.96□□□□□ -2.26
SMAD1-203ENST00000502342 SCELO95171 688 aa0.96□□□□□ -2.26
SMAD1-203ENST00000502342 LSM8O95777 96 aaKnown RBP0.96□□□□□ -2.26
SMAD1-203ENST00000502342 TGM6O95932 706 aa0.96□□□□□ -2.26
SMAD1-203ENST00000502342 CSNK2A2P19784 350 aaPredicted RBP0.96□□□□□ -2.26
SMAD1-203ENST00000502342 PCK1P35558 622 aa0.96□□□□□ -2.26
SMAD1-203ENST00000502342 NDUFA8P51970 172 aa0.96□□□□□ -2.26
SMAD1-203ENST00000502342 ATP5IP56385 69 aaPredicted RBP0.96□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms