RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 EMX1Q04741 257 aaPredicted RBP12.74□□□□□ -0.37
HDAC6-236ENST00000498808 LY6EQ16553 131 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 VMACQ2NL98 169 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 KRTAP27-1Q3LI81 207 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 ZBTB37Q5TC79 503 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 CRIP3Q6Q6R5 217 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 FAM122BQ7Z309 247 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 OAFQ86UD1 273 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 GLB1L2Q8IW92 636 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 NRMQ8IXM6 262 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 BEND2Q8NDZ0 799 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 C17orf50Q8WW18 174 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 SLCO4A1Q96BD0 722 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 ADAT1Q9BUB4 502 aaKnown RBP12.74□□□□□ -0.37
HDAC6-236ENST00000498808 SYT4Q9H2B2 425 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 GRHPRQ9UBQ7 328 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 LHFPL6Q9Y693 200 aa12.74□□□□□ -0.37
HDAC6-236ENST00000498808 HTR3EA5X5Y0 456 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 XKRYO14609 159 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 KHDRBS3O75525 346 aaKnown RBP12.73□□□□□ -0.37
HDAC6-236ENST00000498808 LHBP01229 141 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 CD14P08571 375 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 ACSM4P0C7M7 580 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 SLC9A3P48764 834 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 IDH3AP50213 366 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 KCNMB1Q16558 191 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 MEP1BQ16820 701 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 ANKDD1AQ495B1 522 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 TEX36Q5VZQ5 186 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 CORO6Q6QEF8 472 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 NAA40Q86UY6 237 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 NDUFA11Q86Y39 141 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 CMTM4Q8IZR5 234 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 DPP10Q8N608 796 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 PLPP7Q8NBV4 271 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 GJC3Q8NFK1 279 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 OR4F17Q8NGA8 305 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 SPRYD4Q8WW59 207 aaPredicted RBP12.73□□□□□ -0.37
HDAC6-236ENST00000498808 CLPTM1LQ96KA5 538 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 ZNF570Q96NI8 536 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 OR4F4Q96R69 305 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 SSX3Q99909 188 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 RPS6KA6Q9UK32 745 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 BAG5Q9UL15 447 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 A4GNTQ9UNA3 340 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 POLR1DQ9Y2S0 133 aa12.73□□□□□ -0.37
HDAC6-236ENST00000498808 EFCAB9A8MZ26 197 aa12.72□□□□□ -0.37
HDAC6-236ENST00000498808 RPL4P36578 427 aaKnown RBP12.72□□□□□ -0.37
HDAC6-236ENST00000498808 ST3GAL3Q11203 375 aa12.72□□□□□ -0.37
HDAC6-236ENST00000498808 PGAP1Q75T13 922 aa12.72□□□□□ -0.37
HDAC6-236ENST00000498808 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.72□□□□□ -0.37
HDAC6-236ENST00000498808 FAM156AQ8NDB6 213 aa12.72□□□□□ -0.37
HDAC6-236ENST00000498808 RORBQ92753 470 aa12.72□□□□□ -0.37
HDAC6-236ENST00000498808 DMRTB1Q96MA1 342 aa12.72□□□□□ -0.37
HDAC6-236ENST00000498808 CCL13Q99616 98 aa12.72□□□□□ -0.37
HDAC6-236ENST00000498808 SLC22A4Q9H015 551 aa12.72□□□□□ -0.37
HDAC6-236ENST00000498808 BIRC6Q9NR09 4857 aa12.72□□□□□ -0.37
HDAC6-236ENST00000498808 WI2-2373I1.2A0A1W2PRP0 233 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 A6NLC8 198 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 CD300LBA8K4G0 201 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 CDC42EP2O14613 210 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 CHST1O43916 411 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 GMDSO60547 372 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 ANOS1P23352 680 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 UBE2E1P51965 193 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 SLC18A1P54219 525 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 PRKCDQ05655 676 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 KRR1Q13601 381 aaKnown RBP12.71□□□□□ -0.37
HDAC6-236ENST00000498808 DEFB121Q5J5C9 76 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 WDR38Q5JTN6 314 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 FAM216BQ8N7L0 139 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 WFDC9Q8NEX5 89 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 WIPF2Q8TF74 440 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-236ENST00000498808 AJUBAQ96IF1 538 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 PRRC1Q96M27 445 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 CITED2Q99967 270 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-236ENST00000498808 DCTN5Q9BTE1 182 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 CCDC28BQ9BUN5 200 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 NUAK2Q9H093 628 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 SERTAD4Q9NUC0 356 aa12.71□□□□□ -0.37
HDAC6-236ENST00000498808 VSX1Q9NZR4 365 aaPredicted RBP12.71□□□□□ -0.37
HDAC6-236ENST00000498808 PRPF19Q9UMS4 504 aaKnown RBP12.71□□□□□ -0.37
HDAC6-236ENST00000498808 NOP16Q9Y3C1 178 aaKnown RBP12.71□□□□□ -0.37
HDAC6-236ENST00000498808 EPPK1P58107 5090 aaKnown RBP12.71□□□□□ -0.38
HDAC6-236ENST00000498808 hCG_1807616A0A1W2PRN6 198 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 F5H5K5 113 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 PPP1R3DO95685 299 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 LCATP04180 440 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 GRPP07492 148 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 AMY2BP19961 511 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 PAX6P26367 422 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 ACSM1Q08AH1 577 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 MALLQ13021 153 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 HABP2Q14520 560 aaPredicted RBP12.7□□□□□ -0.38
HDAC6-236ENST00000498808 PCK2Q16822 640 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 CFAP77Q6ZQR2 320 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 PTCHD4Q6ZW05 846 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 MRPL21Q7Z2W9 205 aaKnown RBP12.7□□□□□ -0.38
HDAC6-236ENST00000498808 C8orf46Q8TAG6 207 aa12.7□□□□□ -0.38
HDAC6-236ENST00000498808 SLC7A13Q8TCU3 470 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms