RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 ZNF786Q8N393 782 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 ZNF519Q8TB69 540 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 DNASE2BQ8WZ79 361 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 FRAT1Q92837 279 aaPredicted RBP4.85□□□□□ -1.63
BRCA1-224ENST00000497488 FGF14Q92915 247 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 ZNF524Q96C55 264 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 OTUB2Q96DC9 234 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 RNF126Q9BV68 326 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 ING2Q9H160 280 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 IFT46Q9NQC8 304 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 C3orf18Q9UK00 162 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 LRRC42Q9Y546 428 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 ZBED9Q6R2W3 1325 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 A0A1B0GUL6 1792 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 MYH3P11055 1940 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 CACNA1FO60840 1977 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 CEP350Q5VT06 3117 aa4.85□□□□□ -1.63
BRCA1-224ENST00000497488 SCN9AQ15858 1988 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 GREB1LQ9C091 1923 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-224ENST00000497488 ZNF646O15015 1829 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-224ENST00000497488 A0A1B0GVI7 797 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 FAM220BPB1ANY3 271 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 ANKRD63C9JTQ0 380 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 F6UB75 175 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 PDHXO00330 501 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 NSA2O95478 260 aaKnown RBP4.84□□□□□ -1.63
BRCA1-224ENST00000497488 OCM2P0CE71 109 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 CALM1P0DP23 149 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 CALM2P0DP24 149 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 CALM3P0DP25 149 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 LIPCP11150 499 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 GNRHRP30968 328 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 GPX4P36969 197 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-224ENST00000497488 BTDP43251 543 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 NR4A2P43354 598 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 KIR2DS2P43631 304 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 GDI2P50395 445 aaKnown RBP4.84□□□□□ -1.63
BRCA1-224ENST00000497488 RIDAP52758 137 aaKnown RBP4.84□□□□□ -1.63
BRCA1-224ENST00000497488 SIX1Q15475 284 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-224ENST00000497488 OR7A5Q15622 319 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 COX19Q49B96 90 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 CEP85LQ5SZL2 805 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 SDHAF4Q5VUM1 108 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 FAM53AQ6NSI3 398 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-224ENST00000497488 TTC33Q6PID6 262 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-224ENST00000497488 C19orf48Q6RUI8 117 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 FAM19A1Q7Z5A9 133 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 PPP1R27Q86WC6 154 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 PGAM4Q8N0Y7 254 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 ARRDC1Q8N5I2 433 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 RFLNBQ8N5W9 214 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 LFNGQ8NES3 379 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 OR5AR1Q8NGP9 310 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 OR2A1Q8NGT9 310 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 OR10R2Q8NGX6 335 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 OR5P2Q8WZ92 322 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 TMEM54Q969K7 222 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 FLYWCH2Q96CP2 140 aaKnown RBP4.84□□□□□ -1.63
BRCA1-224ENST00000497488 CMTM5Q96DZ9 223 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 MED8Q96G25 268 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 ADTRPQ96IZ2 230 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 TSNAXQ99598 290 aaKnown RBP4.84□□□□□ -1.63
BRCA1-224ENST00000497488 GPR21Q99679 349 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 MEIS3Q99687 375 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 UPF3AQ9H1J1 476 aaKnown RBP4.84□□□□□ -1.63
BRCA1-224ENST00000497488 ASCL3Q9NQ33 180 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 TIGARQ9NQ88 270 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 EXD2Q9NVH0 621 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 CD274Q9NZQ7 290 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 THAP10Q9P2Z0 257 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-224ENST00000497488 PRG3Q9Y2Y8 225 aaPredicted RBP4.84□□□□□ -1.63
BRCA1-224ENST00000497488 ACOT9Q9Y305 439 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 SNX24Q9Y343 169 aa4.84□□□□□ -1.63
BRCA1-224ENST00000497488 MED23Q9ULK4 1368 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 IGHV4-30-2A0A087WSY4 118 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 FAM166BA8MTA8 275 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 LRRN3E7EW58 273 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 GOLGA6L19H0YKK7 550 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 NTN3O00634 580 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-224ENST00000497488 INSIG1O15503 277 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 NUPL2O15504 423 aaKnown RBP4.83□□□□□ -1.64
BRCA1-224ENST00000497488 CYTH3O43739 400 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 SNAP91O60641 907 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 SEMA4FO95754 770 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 CRYAAP02489 173 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 ORM1P02763 201 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 IFNA6P05013 189 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 RETP07949 1114 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 OR8U9P0C7N5 309 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 GIMD1P0DJR0 217 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 COX5BP10606 129 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 GABRG2P18507 467 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 RAB5AP20339 215 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 HMGCLP35914 325 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 GPR6P46095 362 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-224ENST00000497488 RORCP51449 518 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 CEBPGP53567 150 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 AP3S2P59780 193 aa4.83□□□□□ -1.64
BRCA1-224ENST00000497488 IRX1P78414 480 aaPredicted RBP4.83□□□□□ -1.64
BRCA1-224ENST00000497488 SEMG2Q02383 582 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms