RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 MBOAT2Q6ZWT7 520 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 STHQ8IWL8 128 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 SLC30A8Q8IWU4 369 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 ADGRF3Q8IZF5 1079 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 ARIH2OSQ8N7S6 290 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 SLC38A9Q8NBW4 561 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 TSTD1Q8NFU3 115 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 OR4S1Q8NGB4 309 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 OR52E4Q8NGH9 312 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 OR13G1Q8NGZ3 307 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 ISOC2Q96AB3 205 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 GALMQ96C23 342 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 SLC35E1Q96K37 410 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 CXorf58Q96LI9 332 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 Q96MF0 132 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 RDH12Q96NR8 316 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 P2RX4Q99571 388 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 S100A13Q99584 98 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 H2AFJQ9BTM1 129 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 ACTR3CQ9C0K3 210 aaPredicted RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 OR2J1Q9GZK6 312 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 LAT2Q9GZY6 243 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 TXNIPQ9H3M7 391 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 TUBB1Q9H4B7 451 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 Q9N2J8 555 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 KCNK9Q9NPC2 374 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 KLRF1Q9NZS2 232 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 THAP10Q9P2Z0 257 aaPredicted RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 PILRBQ9UKJ0 227 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 B9D1Q9UPM9 204 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 CARHSP1Q9Y2V2 147 aaKnown RBP2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 V9GYY9 64 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 A0A1B0GUL6 1792 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 MYH3P11055 1940 aa2.74□□□□□ -1.97
SNRNP48-202ENST00000496946 KIR2DL5BA0A0G2JN68 375 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 KIR2DL5BA0A0G2JPC4 375 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 A0A0U1RQF3 1178 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 TMEM269A0A1B0GVZ9 245 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 OR5H15A6NDH6 313 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 OR5H1A6NKK0 313 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF705EA8MWA4 302 aaPredicted RBP2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF878C9JN71 531 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 FTCDNL1E5RQL4 147 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 G3V4G9 280 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 RBFOX2O43251 390 aaKnown RBP eCLIP2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 SYT7O43581 403 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 PRKAB2O43741 272 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 CD74P04233 296 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 UBBP0CG47 229 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 MPC1LP0DKB6 136 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 HIST1H1EP10412 219 aaKnown RBP2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 ABOP16442 354 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 ENGP17813 658 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 AZU1P20160 251 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 MPZP25189 248 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 HTR1FP30939 366 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 GABRA5P31644 462 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 PTGER1P34995 402 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 RPL4P36578 427 aaKnown RBP2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 OR3A4PP47883 348 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 DAP3P51398 398 aaKnown RBP2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 SLC18A1P54219 525 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 CLDN12P56749 244 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 SNRPD1P62314 119 aaKnown RBP2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 ST3GAL3Q11203 375 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 TCP10Q12799 353 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 CRMP1Q14194 572 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 EBPQ15125 230 aaKnown RBP2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 RAB35Q15286 201 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 RHEBQ15382 184 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 GABRA6Q16445 453 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 CTF1Q16619 201 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 CDKN3Q16667 212 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 SNAI3Q3KNW1 292 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 EIF5AL1Q6IS14 154 aaKnown RBP2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 NIPAL3Q6P499 406 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 DOK3Q7L591 496 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 KIR2DL5AQ8N109 375 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 PARP16Q8N5Y8 322 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 C8orf31Q8N9H6 132 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 OR10AD1Q8NGE0 317 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 OR2AE1Q8NHA4 323 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 KIR2DL5BQ8NHK3 375 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 TFB1MQ8WVM0 346 aaKnown RBP2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 RAB8BQ92930 207 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 SCAMP4Q969E2 229 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 UCN3Q969E3 161 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 OR10C1Q96KK4 312 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 NEDD4LQ96PU5 975 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 HIST1H2AAQ96QV6 131 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 NRIP2Q9BQI9 281 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 PAAF1Q9BRP4 392 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF649Q9BS31 505 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 MARVELD1Q9BSK0 173 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 RSPO3Q9BXY4 272 aaPredicted RBP2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 SLIRPQ9GZT3 109 aaKnown RBP2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 SYT4Q9H2B2 425 aa2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 CDC42EP4Q9H3Q1 356 aaKnown RBP2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 ZNF703Q9H7S9 590 aaPredicted RBP2.73□□□□□ -1.97
SNRNP48-202ENST00000496946 TBC1D17Q9HA65 648 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms