RNA–Protein interactions for RNA: ENST00000494323.5

PTCD3-219, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 540 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-219ENST00000494323 RPS6KB2Q9UBS0 482 aa4.35□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF443Q9Y2A4 671 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-219ENST00000494323 POFUT2Q9Y2G5 429 aa4.35□□□□□ -1.71
PTCD3-219ENST00000494323 CACNG2Q9Y698 323 aa4.35□□□□□ -1.71
PTCD3-219ENST00000494323 NOTCH1P46531 2555 aa4.35□□□□□ -1.71
PTCD3-219ENST00000494323 DOCK11Q5JSL3 2073 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 TRRAPQ9Y4A5 3859 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 IGKV1D-42A0A075B6H8 117 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 A0A087WUJ7 227 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 A0A0G2JPF8 293 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 LOC102725191A0A1B0GVB3 256 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 A0A1B0GWA3 101 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 FAM90A10PA6NDY2 464 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF726A6NNF4 738 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 HNRNPCL2B2RXH8 293 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 HNRNPCL3B7ZW38 293 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 LRRN3E7EW58 273 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 C11orf98E9PRG8 122 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 M0QZ24 198 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 HSPA12AO43301 675 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 TRAF3IP2O43734 574 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-219ENST00000494323 OR2T1O43869 369 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 TPST1O60507 370 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 RP2O75695 350 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 ANP32DO95626 131 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 RAB36O95755 333 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 SERPINE1P05121 402 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 SERPINA5P05154 406 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 HNRNPCL4P0DMR1 293 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 BGNP21810 368 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 HTR2AP28223 471 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 CRYBB2P43320 205 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 CRISP3P54108 245 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 DSTNP60981 165 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 UBA52P62987 128 aaKnown RBP4.34□□□□□ -1.71
PTCD3-219ENST00000494323 LCN2P80188 198 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 POU3F1Q03052 451 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-219ENST00000494323 ZP4Q12836 540 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 SCGB2A2Q13296 93 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 PMS2P3Q13401 168 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 PDLIM3Q53GG5 364 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-219ENST00000494323 NHLRC1Q6VVB1 395 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 WDR88Q6ZMY6 472 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 NET1Q7Z628 596 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-219ENST00000494323 COMTD1Q86VU5 262 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF584Q8IVC4 421 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 C10orf53Q8N6V4 93 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 SIGLECL1Q8N7X8 197 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 OR2AK2Q8NG84 335 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 OR1J2Q8NGS2 313 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 NANPQ8TBE9 248 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 SYNPRQ8TBG9 265 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 CCL17Q92583 94 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 GTF3AQ92664 365 aaKnown RBP4.34□□□□□ -1.71
PTCD3-219ENST00000494323 LRR1Q96L50 414 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 ZIM3Q96PE6 472 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 CDRT15Q96T59 188 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 SH3GL3Q99963 347 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 PAIP2Q9BPZ3 127 aaKnown RBP4.34□□□□□ -1.71
PTCD3-219ENST00000494323 WFDC6Q9BQY6 131 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 ZNF416Q9BWM5 594 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 SUCNR1Q9BXA5 334 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 ARMC7Q9H6L4 198 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 RNF121Q9H920 327 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 MEAF6Q9HAF1 191 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 DDX28Q9NUL7 540 aaKnown RBP4.34□□□□□ -1.71
PTCD3-219ENST00000494323 MRGBPQ9NV56 204 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 CALML5Q9NZT1 146 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 SELENONQ9NZV5 590 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 P2RX2Q9UBL9 471 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 OR14J1Q9UGF5 321 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 LGALS13Q9UHV8 139 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 IFT52Q9Y366 437 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 DSPPQ9NZW4 1301 aa4.34□□□□□ -1.71
PTCD3-219ENST00000494323 TRAV36DV7A0A075B6V5 113 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 IGHV4-28A0A0C4DH34 117 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 IGHV1-69-2A0A0G2JMI3 117 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 A0A0G2JMP0 313 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 A0A0X1KG70 313 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 PLPP3O14495 311 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 SDHDO14521 159 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 BIRC5O15392 142 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 TPST2O60704 377 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 SLC22A3O75751 556 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 IGHV2-5P01817 119 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 BGLAPP02818 100 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 IL6P05231 212 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 ADORA3P0DMS8 318 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 OR8G3PP0DMU2 310 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 CCNOP22674 350 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 MC5RP33032 325 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 CSNK1A1P48729 337 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 BIDP55957 195 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 RPS23P62266 143 aaKnown RBP4.33□□□□□ -1.72
PTCD3-219ENST00000494323 MRPS11P82912 194 aaKnown RBP4.33□□□□□ -1.72
PTCD3-219ENST00000494323 GLO1Q04760 184 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 RBBP4Q09028 425 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 STX3Q13277 289 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 RGNQ15493 299 aa4.33□□□□□ -1.72
PTCD3-219ENST00000494323 HFEQ30201 348 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms