RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 DGUOKQ16854 277 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 TIGD6Q17RP2 521 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 ESCO2Q56NI9 601 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 CCNJQ5T5M9 372 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 MRPL2Q5T653 305 aaKnown RBP6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 TMEM236Q5W0B7 351 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 C12orf73Q69YU5 71 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 RASSF6Q6ZTQ3 369 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 OLIG3Q7RTU3 272 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 ZNF367Q7RTV3 350 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 LRP11Q86VZ4 500 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 CROCCP3Q8IVE0 287 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 MRPL41Q8IXM3 137 aaKnown RBP6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 CMIPQ8IY22 773 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 ZNF440Q8IYI8 595 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 RNF113BQ8IZP6 322 aaKnown RBP6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 OR52L1Q8NGH7 329 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 OR9Q1Q8NGQ5 310 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 DUSP19Q8WTR2 217 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 APH1BQ8WW43 257 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 OIT3Q8WWZ8 545 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 RAB40AQ8WXH6 277 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 PIK3R3Q92569 461 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 NSMAFQ92636 917 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 GGHQ92820 318 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 RFKQ969G6 155 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 SLC35B4Q969S0 331 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 AJUBAQ96IF1 538 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 IL4I1Q96RQ9 567 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 SH3GL3Q99963 347 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 FUZQ9BT04 418 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 LMF2Q9BU23 707 aaKnown RBP6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 SLC25A19Q9HC21 320 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 CTPS2Q9NRF8 586 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 MAN2C1Q9NTJ4 1040 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 SERTAD4Q9NUC0 356 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 FKBP14Q9NWM8 211 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 TVP23BQ9NYZ1 205 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 H2AFY2Q9P0M6 372 aaPredicted RBP6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 ZNRD1Q9P1U0 126 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 AASSQ9UDR5 926 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 SLC7A7Q9UM01 511 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 SORL1Q92673 2214 aa6.11□□□□□ -1.43
EXOSC3-206ENST00000489414 IGKV3D-15A0A087WSY6 115 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 A0A087WUU8 490 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 A0A087WZY1 265 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 A0A1W2PPW3 197 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 CDHR4A6H8M9 788 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 CLDN24A6NM45 220 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 C17orf100A8MU93 164 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 KCNK2O95069 426 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 GABARAPO95166 117 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 IGHV2-70P01814 119 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 CELA3BP08861 270 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 CD36P16671 472 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 GABRB1P18505 474 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 MYL12AP19105 171 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 FPR3P25089 353 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 IL12BP29460 328 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 PPICP45877 212 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 GIPRP48546 466 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 EMDP50402 254 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 PNLIPRP2P54317 469 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 GP2P55259 537 aaKnown RBP6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 FGF12P61328 243 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 COPZ1P61923 177 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 CDK5Q00535 292 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 MGAT2Q10469 447 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 OR1Q1Q15612 314 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 PCGF3Q3KNV8 242 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 EXOSC6Q5RKV6 272 aaKnown RBP6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 SLC25A30Q5SVS4 291 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 ZNF613Q6PF04 617 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 MBOAT2Q6ZWT7 520 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 ZER1Q7Z7L7 766 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 ADCK1Q86TW2 530 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 KRTAP19-1Q8IUB9 90 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 CCDC103Q8IW40 242 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 CLIP4Q8N3C7 705 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 C11orf42Q8N5U0 333 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 CLDN22Q8N7P3 220 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 FAM169BQ8N8A8 192 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 TCEANCQ8N8B7 351 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 C8orf46Q8TAG6 207 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 TSEN15Q8WW01 171 aaKnown RBP6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 HOXB13Q92826 284 aaPredicted RBP6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 TMEM80Q96HE8 168 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 FAM46AQ96IP4 442 aaKnown RBP6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 MND1Q9BWT6 205 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 TSSK6Q9BXA6 273 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 CDCA4Q9BXL8 241 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 HOXD1Q9GZZ0 328 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 PLGRKTQ9HBL7 147 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 NOX3Q9HBY0 568 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 AMBNQ9NP70 447 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 MED17Q9NVC6 651 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 NKIRAS2Q9NYR9 191 aa6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 ZNF346Q9UL40 294 aaKnown RBP6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.1□□□□□ -1.43
EXOSC3-206ENST00000489414 GPR55Q9Y2T6 319 aaPredicted RBP6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms