RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 Q5W150 140 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 PRMT9Q6P2P2 845 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 ANGPTL8Q6UXH0 198 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 NTM-AS1Q6ZSK4 140 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 TMCO2Q7Z6W1 182 aaPredicted RBP2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 SPATA24Q86W54 205 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 CALHM1Q8IU99 346 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 APRG1Q8IVJ8 170 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 ZNF695Q8IW36 515 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 COX18Q8N8Q8 333 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 OR8K1Q8NGG5 319 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 COQ8AQ8NI60 647 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 IFT81Q8WYA0 676 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 DCPSQ96C86 337 aaKnown RBP2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 NRBF2Q96F24 287 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 OPALINQ96PE5 141 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 ZNF382Q96SR6 550 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 TIMM17AQ99595 171 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 SPZ1Q9BXG8 430 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 DRC3Q9H069 523 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 NSRP1Q9H0G5 558 aaKnown RBP2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 PIGUQ9H490 435 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 EDA2RQ9HAV5 297 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 ZNF355PQ9NSJ1 428 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 DDX19AQ9NUU7 478 aaKnown RBP2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 DDX18Q9NVP1 670 aaKnown RBP2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 IL20Q9NYY1 176 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 MYEF2Q9P2K5 600 aaKnown RBP2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 ZMAT5Q9UDW3 170 aaKnown RBP2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 MTFP1Q9UDX5 166 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 PRELID1Q9Y255 219 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 RCL1Q9Y2P8 373 aaKnown RBP2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 NKTRP30414 1462 aaKnown RBP2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 IGSF9BQ9UPX0 1349 aa2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 TET2Q6N021 2002 aaPredicted RBP2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 GPATCH8Q9UKJ3 1502 aaKnown RBP2.12□□□□□ -2.07
SNRNP27-204ENST00000487029 FMN1Q68DA7 1419 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 A0A0U1RQV1 116 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 TMEM223A0PJW6 202 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 ZNF705GA8MUZ8 300 aaPredicted RBP2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 BCKDKO14874 412 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 BET1O15155 118 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 RAD51BO15315 384 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 GCM2O75603 506 aaPredicted RBP2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 SEMA3DO95025 777 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 YIF1AO95070 293 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 VAMP5O95183 116 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 YEATS4O95619 227 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 HPRT1P00492 218 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 IFNW1P05000 195 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 MRPL3P09001 348 aaKnown RBP2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 STAG3L3P0CL85 134 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 IL32P24001 234 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 S100A5P33763 92 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 RFC3P40938 356 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 CDKN2DP55273 166 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 SYNJ2BPP57105 145 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 ZNF121P58317 390 aaPredicted RBP2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 LINC00315P59091 139 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 UBE2MP61081 183 aaKnown RBP2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 RPS23P62266 143 aaKnown RBP2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 BASP1P80723 227 aaKnown RBP2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 IRF8Q02556 426 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 TRMT5Q32P41 509 aaKnown RBP2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 LINC00483Q53H64 154 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 SMUG1Q53HV7 270 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 TCEAL5Q5H9L2 206 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 FBXW9Q5XUX1 488 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 TMEM205Q6UW68 189 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 WDR86Q86TI4 376 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 UBALD2Q8IYN6 164 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 SNX31Q8N9S9 440 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 C11orf72Q8NBR9 251 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 SYNPRQ8TBG9 265 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 GLYATL2Q8WU03 294 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 FRZBQ92765 325 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 TCEAL3Q969E4 200 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 HAUS1Q96CS2 278 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 CATSPER2Q96P56 530 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 OLFM3Q96PB7 478 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 FOXC2Q99958 501 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 YIPF3Q9GZM5 350 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 ZDHHC4Q9NPG8 344 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 CYTL1Q9NRR1 136 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 NECAP2Q9NVZ3 263 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 SLC39A1Q9NY26 324 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 AHSPQ9NZD4 102 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 PSME2Q9UL46 239 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 HYOU1Q9Y4L1 999 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 USH1CQ9Y6N9 552 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 GAPVD1Q14C86 1478 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 NLRP1Q9C000 1473 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 GAKO14976 1311 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 CLASP1Q7Z460 1538 aa2.11□□□□□ -2.07
SNRNP27-204ENST00000487029 PALLDQ8WX93 1383 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 SYNJ1O43426 1573 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 PLXNC1O60486 1568 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 SHROOM2Q13796 1616 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 SOGA1O94964 1423 aa2.1□□□□□ -2.07
SNRNP27-204ENST00000487029 BLMP54132 1417 aaPredicted RBP2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms