RNA–Protein interactions for RNA: ENST00000479537.5

BRAF-203, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 5

Gene BRAF, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-203ENST00000479537 TTC19Q6DKK2 380 aaPredicted RBP3.6□□□□□ -1.83
BRAF-203ENST00000479537 OR52W1Q6IF63 320 aa3.6□□□□□ -1.83
BRAF-203ENST00000479537 PCP2Q8IVA1 136 aa3.6□□□□□ -1.83
BRAF-203ENST00000479537 PRSS58Q8IYP2 241 aa3.6□□□□□ -1.83
BRAF-203ENST00000479537 JAGN1Q8N5M9 183 aa3.6□□□□□ -1.83
BRAF-203ENST00000479537 OR5K2Q8NHB8 316 aa3.6□□□□□ -1.83
BRAF-203ENST00000479537 MARCH1Q8TCQ1 289 aa3.6□□□□□ -1.83
BRAF-203ENST00000479537 GIMAP1Q8WWP7 306 aa3.6□□□□□ -1.83
BRAF-203ENST00000479537 PEX13Q92968 403 aa3.6□□□□□ -1.83
BRAF-203ENST00000479537 EXOSC8Q96B26 276 aaKnown RBP3.6□□□□□ -1.83
BRAF-203ENST00000479537 CYYR1Q96J86 154 aa3.6□□□□□ -1.83
BRAF-203ENST00000479537 IFI27L2Q9H2X8 130 aa3.6□□□□□ -1.83
BRAF-203ENST00000479537 FAM49BQ9NUQ9 324 aa3.6□□□□□ -1.83
BRAF-203ENST00000479537 OR12D3Q9UGF7 316 aa3.6□□□□□ -1.83
BRAF-203ENST00000479537 PSME2Q9UL46 239 aa3.6□□□□□ -1.83
BRAF-203ENST00000479537 DOT1LQ8TEK3 1739 aa3.6□□□□□ -1.83
BRAF-203ENST00000479537 ADAMTSL1Q8N6G6 1762 aa3.6□□□□□ -1.83
BRAF-203ENST00000479537 USP34Q70CQ2 3546 aa3.6□□□□□ -1.83
BRAF-203ENST00000479537 DCHS1Q96JQ0 3298 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 SMKR1H3BMG3 65 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 SCAMP2O15127 329 aaKnown RBP3.59□□□□□ -1.83
BRAF-203ENST00000479537 CASC3O15234 703 aaKnown RBP3.59□□□□□ -1.83
BRAF-203ENST00000479537 SERPINE2P07093 398 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 RETP07949 1114 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 POLR2MP0CAP2 368 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 CCL5P13501 91 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 OMGP23515 440 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 OR1E1P30953 314 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 MAGEA1P43355 309 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 TSPO2Q5TGU0 170 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 SPESP1Q6UW49 350 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 IGFL2Q6UWQ7 119 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 C12orf54Q6X4T0 127 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 PQLC3Q8N755 202 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 FAM184AQ8NB25 1140 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 OR10J6PQ8NGY7 276 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 ZFP90Q8TF47 636 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 LRRC29Q8WV35 223 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 TMEM230Q96A57 120 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 ZYG11BQ9C0D3 744 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 LINC00597Q9H2U6 94 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 ISYNA1Q9NPH2 558 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 TMEM9BQ9NQ34 198 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 RPRD1BQ9NQG5 326 aaKnown RBP3.59□□□□□ -1.83
BRAF-203ENST00000479537 PXMP2Q9NR77 195 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 CHRAC1Q9NRG0 131 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 AHSPQ9NZD4 102 aa3.59□□□□□ -1.83
BRAF-203ENST00000479537 MYEF2Q9P2K5 600 aaKnown RBP3.59□□□□□ -1.83
BRAF-203ENST00000479537 RGPD5Q99666 1765 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 MTCL1Q9Y4B5 1905 aaKnown RBP3.58□□□□□ -1.84
BRAF-203ENST00000479537 TRAV25A0A0B4J276 109 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 RAD51CO43502 376 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 LSM8O95777 96 aaKnown RBP3.58□□□□□ -1.84
BRAF-203ENST00000479537 EIF4EP06730 217 aaKnown RBP3.58□□□□□ -1.84
BRAF-203ENST00000479537 UBCP0CG48 685 aaKnown RBP3.58□□□□□ -1.84
BRAF-203ENST00000479537 WARSP23381 471 aaKnown RBP3.58□□□□□ -1.84
BRAF-203ENST00000479537 VSX2P58304 361 aaPredicted RBP3.58□□□□□ -1.84
BRAF-203ENST00000479537 HERVK_113P61574 105 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 ERCC8Q13216 396 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 ITIH4Q14624 930 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 ZNF726P1Q15940 193 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.58□□□□□ -1.84
BRAF-203ENST00000479537 MRPL55Q7Z7F7 128 aaKnown RBP3.58□□□□□ -1.84
BRAF-203ENST00000479537 ENTHD1Q8IYW4 607 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 ZNF786Q8N393 782 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 OR10G4Q8NGN3 311 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 APH1BQ8WW43 257 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 WFIKKN1Q96NZ8 548 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 PIGUQ9H490 435 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 MRPS30Q9NP92 439 aaKnown RBP3.58□□□□□ -1.84
BRAF-203ENST00000479537 KCNE3Q9Y6H6 103 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 UBN2Q6ZU65 1347 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 EVC2Q86UK5 1308 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 KTN1Q86UP2 1357 aaKnown RBP3.58□□□□□ -1.84
BRAF-203ENST00000479537 CARMIL3Q8ND23 1372 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 ZNF609O15014 1411 aa3.58□□□□□ -1.84
BRAF-203ENST00000479537 IGHV3-74A0A0B4J1X5 117 aa3.57□□□□□ -1.84
BRAF-203ENST00000479537 H0YC42 278 aa3.57□□□□□ -1.84
BRAF-203ENST00000479537 H0YHG0 523 aa3.57□□□□□ -1.84
BRAF-203ENST00000479537 SLC9A3R1O14745 358 aaPredicted RBP3.57□□□□□ -1.84
BRAF-203ENST00000479537 CDC40O60508 579 aaKnown RBP eCLIP3.57□□□□□ -1.84
BRAF-203ENST00000479537 SPAG7O75391 227 aa3.57□□□□□ -1.84
BRAF-203ENST00000479537 SLC25A14O95258 325 aaPredicted RBP3.57□□□□□ -1.84
BRAF-203ENST00000479537 HLA-DPB1P04440 258 aa3.57□□□□□ -1.84
BRAF-203ENST00000479537 CT45A6P0DMU7 189 aa3.57□□□□□ -1.84
BRAF-203ENST00000479537 CT45A5P0DMU8 189 aa3.57□□□□□ -1.84
BRAF-203ENST00000479537 CT45A7P0DMV0 189 aa3.57□□□□□ -1.84
BRAF-203ENST00000479537 RPS12P25398 132 aaKnown RBP3.57□□□□□ -1.84
BRAF-203ENST00000479537 LONP1P36776 959 aaKnown RBP3.57□□□□□ -1.84
BRAF-203ENST00000479537 PRRC2AP48634 2157 aaKnown RBP3.57□□□□□ -1.84
BRAF-203ENST00000479537 IFT88Q13099 833 aa3.57□□□□□ -1.84
BRAF-203ENST00000479537 QPRTQ15274 297 aa3.57□□□□□ -1.84
BRAF-203ENST00000479537 RGNQ15493 299 aa3.57□□□□□ -1.84
BRAF-203ENST00000479537 FER1L6Q2WGJ9 1857 aa3.57□□□□□ -1.84
BRAF-203ENST00000479537 PGGHGQ32M88 737 aa3.57□□□□□ -1.84
BRAF-203ENST00000479537 BEX5Q5H9J7 111 aa3.57□□□□□ -1.84
BRAF-203ENST00000479537 CT45A1Q5HYN5 189 aa3.57□□□□□ -1.84
BRAF-203ENST00000479537 PIP5KL1Q5T9C9 394 aa3.57□□□□□ -1.84
BRAF-203ENST00000479537 AGBL2Q5U5Z8 902 aa3.57□□□□□ -1.84
BRAF-203ENST00000479537 GPR107Q5VW38 600 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms