RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 IER3IP1Q9Y5U9 82 aa10.35□□□□□ -0.75
TRAF4-209ENST00000473421 DNAH3Q8TD57 4116 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 J3QW42 95 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 PPP1R3DO95685 299 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 PTBP3O95758 552 aaKnown RBP10.34□□□□□ -0.75
TRAF4-209ENST00000473421 LIPFP07098 398 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 PSKH1P11801 424 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 SELLP14151 372 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 CENPAP49450 140 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 SELENOWP63302 87 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 TRAM2Q15035 370 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 OR8G1Q15617 311 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 SNAI3Q3KNW1 292 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 ZNF730Q6ZMV8 503 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 MBOAT2Q6ZWT7 520 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 WDR86Q86TI4 376 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 C11orf53Q8IXP5 236 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 OR6V1Q8N148 313 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 CELF2-AS1Q8N7Q2 184 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 PNLDC1Q8NA58 520 aaKnown RBP10.34□□□□□ -0.75
TRAF4-209ENST00000473421 OR2AE1Q8NHA4 323 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 ACOT11Q8WXI4 607 aaPredicted RBP10.34□□□□□ -0.75
TRAF4-209ENST00000473421 ST8SIA4Q92187 359 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 CCL13Q99616 98 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 FNDC11Q9BVV2 318 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 HCAR1Q9BXC0 346 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 PPA2Q9H2U2 334 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 CNTD2Q9H8S5 307 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 C1orf123Q9NWV4 160 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 ATPIF1Q9UII2 106 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 VPREB3Q9UKI3 123 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 SIGLEC7Q9Y286 467 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 POLR1DQ9Y2S0 133 aa10.34□□□□□ -0.75
TRAF4-209ENST00000473421 OOEPA6NGQ2 149 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 CD300LBA8K4G0 201 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.33□□□□□ -0.76
TRAF4-209ENST00000473421 GPR37O15354 613 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 AHCYL1O43865 530 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 LHBP01229 141 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 LCATP04180 440 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 GRPP07492 148 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 SDHAP31040 664 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 RPS27P42677 84 aaKnown RBP10.33□□□□□ -0.76
TRAF4-209ENST00000473421 ZNF92Q03936 586 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 SF3A3Q12874 501 aaKnown RBP eCLIP10.33□□□□□ -0.762e-6■■■□□ 15.6
TRAF4-209ENST00000473421 CYLC2Q14093 348 aaPredicted RBP10.33□□□□□ -0.76
TRAF4-209ENST00000473421 CDONQ4KMG0 1287 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 SLC18B1Q6NT16 456 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 FAM216BQ8N7L0 139 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 LY6G5BQ8NDX9 201 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 GJC3Q8NFK1 279 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 SLC26A10Q8NG04 563 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 OR8J3Q8NGG0 315 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 SLC7A13Q8TCU3 470 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 MRAPQ8TCY5 172 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 TSPEARQ8WU66 669 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 TNFRSF14Q92956 283 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 ERGIC1Q969X5 290 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 AJUBAQ96IF1 538 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 MAP6Q96JE9 813 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 HDHD2Q9H0R4 259 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 DPAGT1Q9H3H5 408 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 FN3KQ9H479 309 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 FN3KRPQ9HA64 309 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 SRA1Q9HD15 236 aaKnown RBP10.33□□□□□ -0.76
TRAF4-209ENST00000473421 KIF17Q9P2E2 1029 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 B9D1Q9UPM9 204 aa10.33□□□□□ -0.76
TRAF4-209ENST00000473421 DNAH9Q9NYC9 4486 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 HTR3EA5X5Y0 456 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 VSIG8P0DPA2 414 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 GGT2P36268 569 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 MDH1P40925 334 aaKnown RBP10.32□□□□□ -0.76
TRAF4-209ENST00000473421 EFNB2P52799 333 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 TRAP1Q12931 704 aaKnown RBP10.32□□□□□ -0.76
TRAF4-209ENST00000473421 HERPUD1Q15011 391 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 SEC23BQ15437 767 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 ANKDD1AQ495B1 522 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 PGAP1Q75T13 922 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 LNX2Q8N448 690 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 SPRYD4Q8WW59 207 aaPredicted RBP10.32□□□□□ -0.76
TRAF4-209ENST00000473421 ZNRF4Q8WWF5 429 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 CFHR4Q92496 578 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 RORBQ92753 470 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 PITX2Q99697 317 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 ADAT1Q9BUB4 502 aaKnown RBP10.32□□□□□ -0.76
TRAF4-209ENST00000473421 AURKAIP1Q9NWT8 199 aaPredicted RBP10.32□□□□□ -0.76
TRAF4-209ENST00000473421 CMTM6Q9NX76 183 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 ONECUT1Q9UBC0 465 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 FBLN5Q9UBX5 448 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 FAM96BQ9Y3D0 163 aa10.32□□□□□ -0.76
TRAF4-209ENST00000473421 TRAV38-1A0A0B4J264 116 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 FAM220BPB1ANY3 271 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 NPFFO15130 113 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 NDUFB2O95178 105 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 TXNDC12O95881 172 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 VIMP08670 466 aaKnown RBP10.31□□□□□ -0.76
TRAF4-209ENST00000473421 GABRA5P31644 462 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 SAA4P35542 130 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 TGFBR2P37173 567 aa10.31□□□□□ -0.76
TRAF4-209ENST00000473421 OMPP47874 163 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms